Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0354 ATGGACGGTTTCTCCAACAGAACGGAAAAGGAAGAAACTGATTTTAAGGTGCCTGAAACCATAATCCCCTGCGTCAACAACTGCGGCTTTACCGGTAATCCGGCTACCAATAATATGTGCCAGAATTGCTTCAACGCCACCTCCTCCGCCGCCGCCGCGTCCTCCCCCTCCCCCTCCTCCTCATCGTCTGCCTCTTCCTCTGCAGCTGGAGTTTCAGCGCCTTCTAAATTTGTCGATGACAAGTCGTCTTCTAGATCTACCGCGTCTCGATCTCCTAAGAGATCCTATCCTTCCGATGAGTCTACGCAAACGCCGGATCGGGCGAAGACGTTGGAGGTGGCGCCGTCTGAAGCGAAGCGGGTGGTGAATCGGTGCTCCGGATGCCGGAGGAAAGTCGGGTTGACGGGGTTCCGGTGCCGCTGCGGCGAGTTGTTCTGTGCTGAGCATAGGTACTCCGATCGTCATGATTGCAGCTACGACTACAAAGCCGCCGGACGTGAGGCGATCGCGAGGGAGAATCCGGTGGTCAAAGCTGCGAAGATCGTTAAAGTTTGA 555 0.5568 MDGFSNRTEKEETDFKVPETIIPCVNNCGFTGNPATNNMCQNCFNATSSAAAASSPSPSSSSSASSSAAGVSAPSKFVDDKSSSRSTASRSPKRSYPSDESTQTPDRAKTLEVAPSEAKRVVNRCSGCRRKVGLTGFRCRCGELFCAEHRYSDRHDCSYDYKAAGREAIARENPVVKAAKIVKV 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0354 184 SMART A20_3 21 45 IPR002653 GO:0003677|GO:0008270
Lele09g0354 184 SUPERFAMILY AN1-like Zinc finger 109 178 IPR035896 -
Lele09g0354 184 SMART AN1_Zf_4 125 162 IPR000058 GO:0008270
Lele09g0354 184 PANTHER AN1-TYPE ZINC FINGER PROTEIN 22 183 - -
Lele09g0354 184 FunFam Zinc finger AN1-type containing 6 97 180 - -
Lele09g0354 184 Gene3D - 8 69 - -
Lele09g0354 184 MobiDBLite consensus disorder prediction 50 114 - -
Lele09g0354 184 MobiDBLite consensus disorder prediction 50 109 - -
Lele09g0354 184 Gene3D - 110 170 IPR035896 -
Lele09g0354 184 Pfam A20-like zinc finger 22 45 IPR002653 GO:0003677|GO:0008270
Lele09g0354 184 ProSiteProfiles Zinc finger A20-type profile. 18 52 IPR002653 GO:0003677|GO:0008270
Lele09g0354 184 ProSiteProfiles Zinc finger AN1-type profile. 119 165 IPR000058 GO:0008270
Lele09g0354 184 Pfam AN1-like Zinc finger 125 162 IPR000058 GO:0008270
Lele09g0354 184 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 24 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0354 Lele-ChrLele09 2518259 2521724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0354 11 184 C2H2 Transcription Factor Family AT3G52800 39.655 5.98e-35 119