Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0337 ATGGCAGCCAAATTAATCGTATTTGTAAGACCTGGCCATTGGCTTGAGACATTGCGCTGCGAAGGTCGACAATCGATCTGCAGATTCGCAGTTTCACAAGAAGTAGTGGATCCAGGATACCAAGGCTTTCGCAATTTTCAAACCCTGCGAAAGGCGAGAAGAGCTTCTCCAAGGAATTTGCGTAGCCGAACCCTCCGCCTTCTTAGGCAGGAGGCTATTCTTTTTAGATCTCAACTTAACCCGATTGCTTGCACCGGGTTTCCTGAAAGTTTCAGTCGACCTGCTCTCTACCAAAGACGATCATTTGGGAATTACTCAAATGATGCCCTGCAGTACCTATCCATGCCAGCATGCAGTATTGCTGCAACAACAGGCTCGCCAATCTTTGTTGCTGCTCCAGCTGAGAAAGGACATTTCCTTGTGGACTTTCTCACGGGTGGAGTTTCATCTGCTGTATCAAAAACTGCTGCTGCTCCCATTGAACGTGTCAAACTTCTGATACAAAATCAAGATGAGATGATTAAAGCCGTTAGGCTCTCTGAGCCTTATAAGGGTATTGGGGATTGTTTTAACCGAACAATTCAATCTGAAGGCGCTGTTTCCCTTTGGAGAGGTAACACCGCTAATGTCATCCGTTATTTCCCCACACAGGCGCGGAACTTTGCTTTGAAGGACTACAAGAGGCTTTTTAATTTCAAGAAGGACAAGGATGGTTACGGGAAATGGTTTGCAGGCAACTTGGCCTCTGGAGGAGCTGCGGGTGCTTCATCTCTGTTGTTTGCTTACTCCCTCGACTATGCTCGAACCCGTCTCCCAAATGATGCCAAGGCCGCGAAGAAGGGTGGAGGAGAAAGGCAATTCAATAGACTTGCTGATGTCTACAAGAAGACCTTGGCTTCTGATGGTATTGCTGGCCTTTACCGTGGTTTCAACATCTCATGCGTTGGAATCATTGTGTTTCTTTATTTTGGAATGTATGATTCCCTGAAGCCAGTGCTCTTGACTGGAAAGTTACAGGTTGGTTTTCTCATTCCATGCTTCTCCAAAATTACATTGCATGATCCTTTGTTACTGTTTTTATGGATCTTCTTTGCTAGCTTTGCATTGGGATGGCTCATCACCAATGGTGCAGGGCTAGCATCATACCCCATTGACACAATGAGAAGAAGGATGATGATGACCTCTGGTGAAGCAGTCAAGTACAAGAGCTCCATGGATGCATTTACTCAAATTCTCAAGAACGAAGGCTATAAGTCCTTGTTAAAGGGAGCAGGTAACATCCTCCGTGCCGTTGCCGGAGCCGGTGTGCTCGCCGGTTATGACAAGCTACAGTTATTAGGTGTGCTTAATTTTTCAACAAGATTTCTGATTCCATCATATTTAGGTGTGTAG 1392 0.4569 MAAKLIVFVRPGHWLETLRCEGRQSICRFAVSQEVVDPGYQGFRNFQTLRKARRASPRNLRSRTLRLLRQEAILFRSQLNPIACTGFPESFSRPALYQRRSFGNYSNDALQYLSMPACSIAATTGSPIFVAAPAEKGHFLVDFLTGGVSSAVSKTAAAPIERVKLLIQNQDEMIKAVRLSEPYKGIGDCFNRTIQSEGAVSLWRGNTANVIRYFPTQARNFALKDYKRLFNFKKDKDGYGKWFAGNLASGGAAGASSLLFAYSLDYARTRLPNDAKAAKKGGGERQFNRLADVYKKTLASDGIAGLYRGFNISCVGIIVFLYFGMYDSLKPVLLTGKLQVGFLIPCFSKITLHDPLLLFLWIFFASFALGWLITNGAGLASYPIDTMRRRMMMTSGEAVKYKSSMDAFTQILKNEGYKSLLKGAGNILRAVAGAGVLAGYDKLQLLGVLNFSTRFLIPSYLGV 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0337 463 ProSiteProfiles Solute carrier (Solcar) repeat profile. 137 230 IPR018108 -
Lele09g0337 463 SUPERFAMILY Mitochondrial carrier 138 435 IPR023395 -
Lele09g0337 463 Pfam Mitochondrial carrier protein 363 442 IPR018108 -
Lele09g0337 463 Pfam Mitochondrial carrier protein 242 335 IPR018108 -
Lele09g0337 463 Pfam Mitochondrial carrier protein 138 231 IPR018108 -
Lele09g0337 463 PRINTS Adenine nucleotide translocator signature 366 382 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lele09g0337 463 PRINTS Adenine nucleotide translocator signature 241 254 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lele09g0337 463 PRINTS Adenine nucleotide translocator signature 139 151 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lele09g0337 463 PRINTS Adenine nucleotide translocator signature 216 228 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lele09g0337 463 PRINTS Adenine nucleotide translocator signature 183 204 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lele09g0337 463 ProSiteProfiles Solute carrier (Solcar) repeat profile. 365 446 IPR018108 -
Lele09g0337 463 Gene3D Mitochondrial carrier domain 140 447 IPR023395 -
Lele09g0337 463 PRINTS Mitochondrial carrier protein signature 205 225 IPR002067 GO:0055085
Lele09g0337 463 PRINTS Mitochondrial carrier protein signature 256 274 IPR002067 GO:0055085
Lele09g0337 463 PRINTS Mitochondrial carrier protein signature 370 392 IPR002067 GO:0055085
Lele09g0337 463 PRINTS Mitochondrial carrier protein signature 142 155 IPR002067 GO:0055085
Lele09g0337 463 PRINTS Mitochondrial carrier protein signature 155 169 IPR002067 GO:0055085
Lele09g0337 463 PRINTS Mitochondrial carrier protein signature 307 325 IPR002067 GO:0055085
Lele09g0337 463 ProSiteProfiles Solute carrier (Solcar) repeat profile. 241 332 IPR018108 -
Lele09g0337 463 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 133 446 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0337 Lele-ChrLele09 2395023 2399214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0337 86 446 Antiporters AT5G13490 75.000 2.96e-176 497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0337 09 2395023 2399214 Lele10g0321 10 2149373 2151206 ECH
Lele09g0337 09 2395023 2399214 Lele09g0337 09 2395023 2399214 ECH
Lele09g0337 09 2395023 2399214 Lele11g0335 11 3398122 3408127 hybridization
Lele09g0337 09 2395023 2399214 Lele12g0958 12 17311648 17313482 hybridization