Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0334 ATGTTGACGAATGGACAAGGTTGTTGGAGTGACATTGCCAGAAATGCAGGCCTTCAACGTTGTGGCAAAAGTTGTCGCCTTCGTTGGATTAATTATCTCAGACCTGACCTTAAGAGAGGTGCTTTCTCTCTCCAAGAAGAACAGCTCATTCTTCATTTCCATTCCATTCTTGGAAATAGGCAGAATTTCGAACTGATGCAGGGTTCTCAATGCATAGGTTTTTGGATAGCAGCACGTCTTCCAGGACGCACAGACAATGAGATTAAGAATTTCTGGAACTCTACTTTGAAGAAAAGGATGAAAAACAACACTACTTATACTACTACTGCTGCTACTACTTCCACTGCAACGCCATCACCAAACAACAGCACAGATTCATCATCAAATCATCATATTATTCTGAATGGCACCACCACTTCTTCTTCCATACCCTTCATGAACATGACTATGTGCATGGACTCATCACCTTCATCAGCGTCCGTACAATCCATGCAAGCCTCGGCGACTTTTGGTGGTGGTGGTGACCACCAGTTAATGGAGTATCCCTTTTCCATGTTGAATAATAACAACTGTCATATTCCTTATGACATGTCTGCATGCTTAACCCAGGTTGGTGGTGGCCATGGCATGGTGGAGGATGGGTTTTATGGTGAAGATTATAATAATAATAATAATGGGATGGTGTTAGAGGGAGAAGATAGTAGAATAATGGGGTTAGAAAGAGACCTGCGTCTTCCTCCTCTTGAGAGTAGAAGCATGGAAGAGAAGTATAATAGTACCGGTGTTGTTATTGATCATGTGAGAAGTCATATCATCAACAACAACCATTTTAATAATGGTTGCTTCAATCACACTGATCATCATCATCAGGACTTGGTTGGGTTTGGAAATAATAATAATCATGGGCAATCGGGGGGAAACTTAAGAATGGGAGAATGGGATTTGGAGGGTTTGATGCAAGATATATCCTCTTTTCCTTTCCTTGATTTCCAAGTTGAATGA 1002 0.4132 MLTNGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSLQEEQLILHFHSILGNRQNFELMQGSQCIGFWIAARLPGRTDNEIKNFWNSTLKKRMKNNTTYTTTAATTSTATPSPNNSTDSSSNHHIILNGTTTSSSIPFMNMTMCMDSSPSSASVQSMQASATFGGGGDHQLMEYPFSMLNNNNCHIPYDMSACLTQVGGGHGMVEDGFYGEDYNNNNNGMVLEGEDSRIMGLERDLRLPPLESRSMEEKYNSTGVVIDHVRSHIINNNHFNNGCFNHTDHHHQDLVGFGNNNNHGQSGGNLRMGEWDLEGLMQDISSFPFLDFQVE 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0334 333 ProSiteProfiles Myb-like domain profile. 34 96 IPR001005 -
Lele09g0334 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 37 IPR017930 -
Lele09g0334 333 ProSiteProfiles Myb-like domain profile. 1 33 IPR001005 -
Lele09g0334 333 Gene3D - 1 38 - -
Lele09g0334 333 Pfam Myb-like DNA-binding domain 8 49 - -
Lele09g0334 333 SMART sant 38 98 IPR001005 -
Lele09g0334 333 SMART sant 3 35 IPR001005 -
Lele09g0334 333 SUPERFAMILY Homeodomain-like 4 92 IPR009057 -
Lele09g0334 333 MobiDBLite consensus disorder prediction 108 130 - -
Lele09g0334 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 100 IPR017930 -
Lele09g0334 333 CDD SANT 41 96 IPR001005 -
Lele09g0334 333 PANTHER MYB DOMAIN PROTEIN 55 1 240 - -
Lele09g0334 333 Gene3D - 40 125 - -
Lele09g0334 333 CDD SANT 5 33 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0334 Lele-ChrLele09 2374887 2377280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0334 1 333 MYB Transcription Factor Family AT3G08500 40.407 1.15e-55 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele09g0334 Myb_DNA-bind_6 1.2e-06 CL0123