Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0323 ATGGAGGCTGCGGTCGTCGACGCTGGCTCAAAGCTCCTCAAAGCGGGATTCGCTATCCCCGATCAGGCTCCAGCTATGGTCATTCCTACCCAGATGAAACGCATGCCTGATGATGGATCAGTGACTGACAATTCGTTAGTTGATGATGTTACCATCGATCCAATTGTGAGAGGGTTTGTCAGCGATTGGGATGCAATGGAGGATTTGTTGCACCATGTTTTATATACTGGCCTGGGATGGGAAATTGGCAATGAAGGGCAAATTCTATTTACAGATCCTCTTTGTACGCCAAAGGCTAATAAAGAACAGTTAGTGCAACTAATGTTTGAAACATTCAACATATCAGGCTTTTATGCCTCAGAACAAGCAGTGCTCTCGCTATATGCTGTGGGACGTATCTCAGGATGCACAGTTGATATTGGTCATGGAAAAATAGATATTGCACCCGTAATTGAGGGTGCTGTTCATCACATTGCCTCAAAAAGATTTGAGTTTGGAGGCATTGATTTAACAAATTTCTTGGCTCAAGAACTTGGCAAGTCAAATCCGCTTGTAAGCATCAGCTTGTCTGAAGTTGAGAAAATAAAAGAGCAATACTCATGTTGTGCTGAAGATGAATTAGCTTATCAGAAGACCCTGGATTCTTGTGTTCCAGAGAAACATACCCTGCCTGATGGACAGGTGATAACTATTGGGAGGGAAAGATATACTGTTGGCGAAGCGTTATTCCAGCCATCTCTATTGGGTTTAGAGACACATGGAATCGTTGAACAGCTTGTACGAACTATTTCAACTGTGTCATCAGATAATCACCGGCAACTGCTGGAAAATACTGTGGTTTGTGGTGGCCCTTCTAGTATGACTGGTTTTGAAGAAAGGTTTCAGAAGGAAGCTAACCTGACTTCATCTGCAATTCGACCCACTCTTGTTAAGCCTCCAGAATACATGCCAGAAAATCTAACGACATATTCTGCATGGGTGGGAGGTGCCATACTTGCCAAAGTAGTTTTCCCACAAAATCAGCACGTAACTAAGGCGGACTACGACGAAACCGGACCATCCATCGCTCACCGGAAATGTTTCTGA 1086 0.4392 MEAAVVDAGSKLLKAGFAIPDQAPAMVIPTQMKRMPDDGSVTDNSLVDDVTIDPIVRGFVSDWDAMEDLLHHVLYTGLGWEIGNEGQILFTDPLCTPKANKEQLVQLMFETFNISGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVHHIASKRFEFGGIDLTNFLAQELGKSNPLVSISLSEVEKIKEQYSCCAEDELAYQKTLDSCVPEKHTLPDGQVITIGRERYTVGEALFQPSLLGLETHGIVEQLVRTISTVSSDNHRQLLENTVVCGGPSSMTGFEERFQKEANLTSSAIRPTLVKPPEYMPENLTTYSAWVGGAILAKVVFPQNQHVTKADYDETGPSIAHRKCF 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0323 361 CDD NBD_sugar-kinase_HSP70_actin 4 168 - -
Lele09g0323 361 Gene3D - 123 324 - -
Lele09g0323 361 SUPERFAMILY Actin-like ATPase domain 2 138 IPR043129 -
Lele09g0323 361 Gene3D - 5 355 - -
Lele09g0323 361 FunFam Actin-related protein 7 165 252 - -
Lele09g0323 361 PRINTS Actin signature 100 113 IPR004000 -
Lele09g0323 361 PRINTS Actin signature 217 233 IPR004000 -
Lele09g0323 361 PRINTS Actin signature 23 32 IPR004000 -
Lele09g0323 361 PRINTS Actin signature 125 144 IPR004000 -
Lele09g0323 361 SMART actin_3 1 361 IPR004000 -
Lele09g0323 361 SUPERFAMILY Actin-like ATPase domain 131 361 IPR043129 -
Lele09g0323 361 Pfam Actin 2 361 IPR004000 -
Lele09g0323 361 PANTHER ACTIN 4 354 IPR004000 -
Lele09g0323 361 FunFam Actin-related protein 7 4 127 - -
Lele09g0323 361 Gene3D Actin; Chain A, domain 4 165 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0323 Lele-ChrLele09 2274838 2278989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0323 5 361 Cytoskeleton Gene Families AT3G18780 38.462 1.31e-72 229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0323 09 2274838 2278989 Lele09g0323 09 2274838 2278989 ECH
Lele09g0323 09 2274838 2278989 Lele11g0321 11 3296648 3302226 hybridization