Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0294 ATGAGCACAGAAACTTGCTGCTGGGTCCTTTTCCTTCTCTCAACACTACTCTTTGTGGATGAAATCCATGGAAGCAGAAAGCAAGAACAAGCTCTCAGGAATCTGAACAAGGCCAAGTTCTGGGGAGGTTCCATTGACAGAAGCAGTGAAACGATCTTGGAGGTAGATAATAATAAGGCTGCGTTTGGCGACTTTGATGATGATAATAAGTCTCGTTACTATTATCCTCAACAAGGTTTGAAAGAGAAAGATAGGATTGAGAGACTTCCAGGGCAACCTCAAGGTGTGAGTTTCTCTCAGTATGGAGGATATGTTACTGTAGATAAAATTGCAGGAAGAGCTTTTTATTATTATTTTGTTGAAGCTCAACAATCTTACCATAGCCACAAATTGCCTCTTCTTCTCTGGCTCAATGGAGGTCCAGGATGTTCATCCCTTGCGTATGGAGCAATGCAAGAACTTGGACCATTCCGAGTAAACAGCGATGGCAAAACACTTCACACCAACAAATACTCTTGGAACCATGCTGCAAATGTGTTGTTTTTAGAATCACCAGCTGGAGTGGGATTTTCATATTCAAACAGAACATCGGATTATGACAACAATGGGGACAGAAAAACTGCTTCAGACAACTATGTGTTCTTGAGGAACTGGTTGGAGAGGTTTCCTGAATATAAGAATTCAGATTTCTACATTTCTGGAGAGAGCTATGCAGGCCACTATGTTCCTCAACTTGCTCATACCATTCTCCATCACAACAACCATCCCAATTCCTCCTCCTTTATCAACCTCAAAGGCATCTTGATAGGGAATGCAGTGATAAATGATGGGACAGATAGCAAAGGGATGTGGGATTTTTTGGCAAGCCATGCCATAATATCAGACCAAGCGGCTAATGATGTGAACAAATTATGTGATTTCTCAGATCTAGATGTTGCCTCAAACCAGAGCAGTGAATGCATGGCGGCTTCTGATGAAATAGATAGAGATATTGAGTCCATTGATATTTACAACATCTATGCTCCTCAATGCCTTGATTCCAACCTCACTTCGCTCCCTAAGCCTCCCTCTGTAGTGACAGAACCATGTAGCGATACTTATGTATATGCATACCTGAACCGAGCTGAGGTACAAGAGGCATTGCATGCCAATGTGACAAAGCTCACACATGACTGGGAGCCTTGCAGCAATGTTATCTCTCGATGGGTTGATAGTGCTTCCACAGTGCTTCCCCTCTTGCATGAGTTCCTGAATCATAGCCTTCAAGTTTGGATCTTTAGTGGAGACATAGATGGGAGAGTGCCAATAACTTCAACTAAGTATTCTATTGAGAAAATGAATCTTCCAGTTAAGACTACTTGGCATCCTTGGTTCGTGAATGGAGAGGTAGGAGGATACACAGAGGTATATAAGGGGGGATTAACACTTGCAACAGTGAGAGAAGCAGGACATCAAGTGCCAAGTTATCAGCCAGCAAGAGCTCTTTCTTTAGTCCATCACTTCTTAAAAGGCATCCCTCTTCCTAATACCACCCCACGTACCCCTAATTTCTAG 1554 0.4266 MSTETCCWVLFLLSTLLFVDEIHGSRKQEQALRNLNKAKFWGGSIDRSSETILEVDNNKAAFGDFDDDNKSRYYYPQQGLKEKDRIERLPGQPQGVSFSQYGGYVTVDKIAGRAFYYYFVEAQQSYHSHKLPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLHTNKYSWNHAANVLFLESPAGVGFSYSNRTSDYDNNGDRKTASDNYVFLRNWLERFPEYKNSDFYISGESYAGHYVPQLAHTILHHNNHPNSSSFINLKGILIGNAVINDGTDSKGMWDFLASHAIISDQAANDVNKLCDFSDLDVASNQSSECMAASDEIDRDIESIDIYNIYAPQCLDSNLTSLPKPPSVVTEPCSDTYVYAYLNRAEVQEALHANVTKLTHDWEPCSNVISRWVDSASTVLPLLHEFLNHSLQVWIFSGDIDGRVPITSTKYSIEKMNLPVKTTWHPWFVNGEVGGYTEVYKGGLTLATVREAGHQVPSYQPARALSLVHHFLKGIPLPNTTPRTPNF 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0294 517 FunFam Carboxypeptidase 79 354 - -
Lele09g0294 517 FunFam Carboxypeptidase 409 504 - -
Lele09g0294 517 Gene3D - 409 504 - -
Lele09g0294 517 PRINTS Carboxypeptidase C serine protease (S10) family signature 182 192 IPR001563 GO:0004185|GO:0006508
Lele09g0294 517 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 181 IPR001563 GO:0004185|GO:0006508
Lele09g0294 517 PRINTS Carboxypeptidase C serine protease (S10) family signature 474 487 IPR001563 GO:0004185|GO:0006508
Lele09g0294 517 PRINTS Carboxypeptidase C serine protease (S10) family signature 218 243 IPR001563 GO:0004185|GO:0006508
Lele09g0294 517 Gene3D alpha/beta hydrolase 80 345 IPR029058 -
Lele09g0294 517 ProSitePatterns Serine carboxypeptidases, serine active site. 232 239 IPR018202 GO:0004185
Lele09g0294 517 Pfam Serine carboxypeptidase 90 504 IPR001563 GO:0004185|GO:0006508
Lele09g0294 517 Gene3D - 363 400 - -
Lele09g0294 517 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 85 491 IPR001563 GO:0004185|GO:0006508
Lele09g0294 517 SUPERFAMILY alpha/beta-Hydrolases 86 508 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0294 Lele-ChrLele09 2076297 2084115 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0294 371 507 Calmodulin-binding Proteins AT2G22960 29.927 1.24e-14 70.5