Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0293 ATGAAGTTGACATGTCCTGGATGCTCATCTTTAGGGTATGGAGCAATGCAAGAATTGGGACCATTCCGAGTAAACAGTGATGGCAAAACACTTCAAACAAACAAATACTCTTGGAACTATGCTTCAAATGTATTATTTTTGGAATCACCTGCTGGAGTGGGATTTTCATATTCAAACAAGACATCAGATTATGACAATAATGGGGACAGAAAAACTGCTACAGACAACTATGTGTTTTTGAGGAACTGGTTGGAGAGGTTTCCTGAGTATAAGAATTCTGATTTCTACATTGCTGGGGAGAGCTATGCAGGCCATTATGTTCCTCAACTTGCTCATAACATTCTCCATCACAACAACCATCCCAATTCCTCCTTCATCATCAACCTCAAAGGAATCTTGATAGGGAATGCAGTGATAAATGATGAGACGGACAACAGAGGAAGATGGGATTTCTTGGCAAGCCATGCCATAATATCAGACAAAGCAGCGCATGCTGTAAGCAAATTGTGTGATTTCTCAGAGACTGAGTCATCTTCTGATCAAGACAATGAATGCAGAGAAGCATCAAATGAAATAGAGAAAGACACTGGCTCCATAAATATATACAACATCTATGCTCCTCAGTGCCATGATTCTGATCTCACTTCCATCCCTAAGGCCCCTTCTATAGTGGCGGACCCATGTATTGATGATTATGTGTATGAATATATGAACCGGGTTGAGGTGCAAGAGGCACTACATGCCAATGTCACAAAGTTGAGTCATGATTGGGAACTTTGCAGCGATGTCATCACCATGTGGGTTGATAGCCCTTCCACTGTGCTTCCTCTTTTGAAAGAGTTCCTCCACCAAAGCCTAAGGGTTTGGATGTTTAGTGGTGACTTTGACGGAATGGTACCAGTGACTTCAACAAAGTATTCCGTTGACAAGTTAAAACTCCCTCCTAAGACTATGTGGCACCCCTGGTTCCTCAATGGAGAGGTAGGAGGGTATACAGAGGTATATAAGGGAGGCTTAACGTTTGCAACTGTGAGAGGAGCCGGGCATGAAGTGCCAAGCTACCAGCCCGCAAGAGCCCTTTCTTTGGTCAACCACTTCTTGAAAGGCACCCCTCTTCCTAAGACCACTACCCCCACACACATGATTTGA 1149 0.4343 MKLTCPGCSSLGYGAMQELGPFRVNSDGKTLQTNKYSWNYASNVLFLESPAGVGFSYSNKTSDYDNNGDRKTATDNYVFLRNWLERFPEYKNSDFYIAGESYAGHYVPQLAHNILHHNNHPNSSFIINLKGILIGNAVINDETDNRGRWDFLASHAIISDKAAHAVSKLCDFSETESSSDQDNECREASNEIEKDTGSINIYNIYAPQCHDSDLTSIPKAPSIVADPCIDDYVYEYMNRVEVQEALHANVTKLSHDWELCSDVITMWVDSPSTVLPLLKEFLHQSLRVWMFSGDFDGMVPVTSTKYSVDKLKLPPKTMWHPWFLNGEVGGYTEVYKGGLTFATVRGAGHEVPSYQPARALSLVNHFLKGTPLPKTTTPTHMI 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0293 382 FunFam Carboxypeptidase 44 211 - -
Lele09g0293 382 ProSitePatterns Serine carboxypeptidases, histidine active site. 339 356 IPR033124 GO:0004185
Lele09g0293 382 Gene3D - 274 369 - -
Lele09g0293 382 ProSitePatterns Serine carboxypeptidases, serine active site. 97 104 IPR018202 GO:0004185
Lele09g0293 382 Pfam Serine carboxypeptidase 6 369 IPR001563 GO:0004185|GO:0006508
Lele09g0293 382 PRINTS Carboxypeptidase C serine protease (S10) family signature 34 46 IPR001563 GO:0004185|GO:0006508
Lele09g0293 382 PRINTS Carboxypeptidase C serine protease (S10) family signature 339 352 IPR001563 GO:0004185|GO:0006508
Lele09g0293 382 PRINTS Carboxypeptidase C serine protease (S10) family signature 47 57 IPR001563 GO:0004185|GO:0006508
Lele09g0293 382 PRINTS Carboxypeptidase C serine protease (S10) family signature 83 108 IPR001563 GO:0004185|GO:0006508
Lele09g0293 382 Gene3D - 228 265 - -
Lele09g0293 382 Gene3D alpha/beta hydrolase 4 211 IPR029058 -
Lele09g0293 382 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 356 IPR001563 GO:0004185|GO:0006508
Lele09g0293 382 FunFam Carboxypeptidase 274 369 - -
Lele09g0293 382 SUPERFAMILY alpha/beta-Hydrolases 6 373 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0293 Lele-ChrLele09 2070352 2073635 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0293 236 372 Calmodulin-binding Proteins AT2G22960 29.197 6.26e-14 67.8