Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0291 ATGGGCAGAGAAACTTGGTGGGTCCTTTTCCTTCTCTCAACACTACTAGTCGTACCAGATGAAAGCCATGGAAGCAGAAGGCAAGGACAAGCTCTCAAGAATCTGAACAAGGCCAAGTTCTGGGGAGGTTCCATTGACAGAAGCAGTGAAACAATCTTGGAGGTAGATAATAATAAGGCTGTGTTTGGCGACCATGATTATGATAAGTCTCGTTACTATTATCCTCAGCAAGGTTTAAAGGAGAAAGATAGAATAGAGAAACTTCCAGGGCAACCTCAAGGTGTGAGTTTCTCTCAATATGGAGGATATGTGACTGTAGATAAAATTGCAGGAAGAGCTTTTTATTATTATTTTGTTGAAGCTCAACGATCTCATTATACCCACAAATTGCCTCTTCTTCTCTGGCTCAATGGAGGTCCAGGATGTTCATCTCTAGCGTACGGAGCAATGCAAGAACTTGGACCATTCCGAGTAAACAGTGACGGCAAAACACTTCACTCCAACAAATATTCATGGAACTATGCTGCAAATGTATTGTTTTTGGAATCACCAGCTGGAGTGGGATTTTCATACTCAAACAAGACATCAGATTACAACAATAACGGGGACAGAAGAACTGCAGCAGACAACTATGTGTTTTTAAGGAACTGGTTGGAGAGGTTTCCTGAGTATAAGAATTCTGATTTTTATATTGCTGGGGAGAGCTATGCAGGCCACTATGTTCCTCAGCTTGCTCATACCATTCTCCATCACAACAACCACCCCAACTCCACCTTCTTCATCAACCTCAAAGGCATCTTGATAGGGAATGCAGTGATGAATGATGAGACTGACAACAGAGGAAGTTTGGATTACTGGGCAAGTCATGCCCTAATATCAGAGAAAGCAGCGTGTGATGCCAACAAATATTGCGACTTCTCAGAGGTTGCCACTAGTCAGAGAAAAGAGTGCGAAGCAGCATGGGAAGAAATAGGCAAAAATACTGGCTACATTGATATTTACAACATCTATGCTCCTCTATGTCATGATTCCAACCTCACTTCCCTCCCCAAGCCTCACTCTGAAGTGATAGACCCATGCAGTGATGATTATGTGTACGCATACATGAACCGGGTTGAGGTACAAGAAGCATTACATGCGAATGTGACAAAACTCACACATGAATGGCAACCTTGTAAAGGTGGTCACTGGATGGATTCCCCTTCTTCTATACTTCCCCTCTTACAAGAGTTCCTCACTCATAGCCTACGTCTTTGGATTTACAGTGGTGACGTAGATGGAGTGGTGCCGGTGACTTCAACCAAGTATTCCATTAAGAAGTTGAATCTCACTGTGAGGACTGGTTGGCATCCCTGGTTTGTAAATGGAGAGGTAGGAGGATACACAGAAGTATACAAGGGAGGCTTAACGTTTGCAACAGTGAGAGGAGGAGGGCATGAAGTGCCAAGCTACCAGCCAGCAAGAGCCCTTTCTTTGGTCAACCACTTCTTGAAAGGCATCCCTCTTCCTAATACCACTACCTCAACACATGCCTAA 1536 0.4375 MGRETWWVLFLLSTLLVVPDESHGSRRQGQALKNLNKAKFWGGSIDRSSETILEVDNNKAVFGDHDYDKSRYYYPQQGLKEKDRIEKLPGQPQGVSFSQYGGYVTVDKIAGRAFYYYFVEAQRSHYTHKLPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLHSNKYSWNYAANVLFLESPAGVGFSYSNKTSDYNNNGDRRTAADNYVFLRNWLERFPEYKNSDFYIAGESYAGHYVPQLAHTILHHNNHPNSTFFINLKGILIGNAVMNDETDNRGSLDYWASHALISEKAACDANKYCDFSEVATSQRKECEAAWEEIGKNTGYIDIYNIYAPLCHDSNLTSLPKPHSEVIDPCSDDYVYAYMNRVEVQEALHANVTKLTHEWQPCKGGHWMDSPSSILPLLQEFLTHSLRLWIYSGDVDGVVPVTSTKYSIKKLNLTVRTGWHPWFVNGEVGGYTEVYKGGLTFATVRGGGHEVPSYQPARALSLVNHFLKGIPLPNTTTSTHA 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0291 511 ProSitePatterns Serine carboxypeptidases, serine active site. 231 238 IPR018202 GO:0004185
Lele09g0291 511 Gene3D - 404 499 - -
Lele09g0291 511 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 84 486 IPR001563 GO:0004185|GO:0006508
Lele09g0291 511 Gene3D - 360 395 - -
Lele09g0291 511 ProSitePatterns Serine carboxypeptidases, histidine active site. 469 486 IPR033124 GO:0004185
Lele09g0291 511 FunFam Carboxypeptidase 79 343 - -
Lele09g0291 511 FunFam Carboxypeptidase 404 499 - -
Lele09g0291 511 Gene3D alpha/beta hydrolase 79 343 IPR029058 -
Lele09g0291 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 180 IPR001563 GO:0004185|GO:0006508
Lele09g0291 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 181 191 IPR001563 GO:0004185|GO:0006508
Lele09g0291 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 217 242 IPR001563 GO:0004185|GO:0006508
Lele09g0291 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 469 482 IPR001563 GO:0004185|GO:0006508
Lele09g0291 511 Pfam Serine carboxypeptidase 89 499 IPR001563 GO:0004185|GO:0006508
Lele09g0291 511 FunFam Carboxypeptidase 357 502 - -
Lele09g0291 511 SUPERFAMILY alpha/beta-Hydrolases 81 503 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0291 Lele-ChrLele09 2059109 2063672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0291 368 502 Calmodulin-binding Proteins AT2G22960 33.088 1.20e-17 79.3