Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0253 ATGAGAAGATCCACTCTCTTTTCCATCCCGTTCCTCCTTTCCTTCCTCTGGTACAGTTCATCTCTGTCCAGTGCCTCCTCTGACCTTGATGCTCTGCTCAAGCTCAAAGCTTCCCTCAAGGGACCCAAAGCTTCACCTTCTGCCATGGAGGACTGGGAACCCTCTGTTTCTCTCTCTGCTCACTGTAACTTCACTGGAGTTTCCTGCGATGAGAATTTCAGGGTTGTCTCTTTGAATATCTCGTTCCATCCCCTATTCGGCTCTATTCCGCCGGAGATCGGCCAAATGGACAAGCTTGTCTCTCTCACCCTTTCACAAGACAACCTCACCGGCGAGCTTCCCAAACAGCTCGCCAACCTTACTTCTCTGCAAGTCCTCAATATTTCACACAACGCCCTTACTGGAGACTTCCCAGGTGAAATCACTCTCAACATGTCGGAGCTTGAGGTTCTAGACGTTTATGATAACAGCTTCAACGGCACGTTACCGGAGGAGGTAGTGAAATTGAAGAAACTGAAGCAGCTCTGGCTCGCCGGGAACTACTTTTCTGGCTTGATACCAGAGAGTTATTCGCACTTTGAGAGCTTGGAAATTCTGAAGCTGAATGAGAACAGCCTCAGAGGGAAAATCCCGGCGAGTTTAGCAAACTTGAAGAAGCTCAGGGAATTGTATTTGGGTTATAGTAATGCATACCAAGGAGGGGTCCCACCGGAGCTAGGCAATATGAGCACGCTTCAACTGATCGATTTAGCAAACTGTAATCTATCTGGAGAGATTCCACCGGAGCTAGGTAATTTGAAGAAAGTTCATACTCTGTTCCTTCAAATGAACAATCTCACCGGAGAAATCCCATCTGAACTCTCCGGCATGACTAGCCTCATGTCGCTTGATTTATCCATCAACAGCCTCACCGGAGAGATACCCTCCAGTTTTTCCAAACTCACGAACCTAACTTTGATCAATTTGTATGAAAACAAGCTTCGTGGCCCTATCCCGTCATTCATCGGAGACCTTCCGAATTTGGAAGTTCTTCACGTTTGGGAGAACGATTTCTCGTTCATCTTACCGGAAAATCTGGGCAGCAACGGGAGATTTAAGAAGATTGACGTCACGAGCAATCATTTCACAGGATTGGTTCCGAAAGATCTGTGTAAAGGAGGAAGGTTGGAGATTTTCATTCTCATGAATAATTCCTTCGACGGTCCGATTCCTGAGCAGCTCGGCGAGTGTATGTCTTTGACAAAAGTTCGAATTTCTAATAATTTCCTCAGTGGATCGATCCCTCCTGGGTTTTTCAATCTTCCTTCTGCGTCTATGATCGATCTCAGTAACAACTTGTTATCCGGCGAGCTACCGACGGATATGTCAGGTGATGTTCTCGGGATTTTGACCCTTTCGTATAATTCAATCACCGGGAAAATCCCACCCGCTATCAGAAAGCTCCGGACCTTGCAGAATCTTCAACTAGACGTGAACCATTTTGTTGGCGAGATTCCCAAGGAAATGTTCGACTTGCCGATGCTGACGAAGGTGAACATCAGCTTCAACAACCTCAGCGGTCCGATTCCTGATTCCATCACTCACTGTGCTTCCTTAACCGCTGTTGATCTCTGCCGGAACAAGCTCGTCGGAGAAATCCCGAGAGCGATCAATAACATAACAGATCTCAGCATCCTCAACCTCTCAATGAACCACCTAACAGGTTCAATCCCAGACGAAATCCGTTACATGGTGAGCCTGACCACACTCGACCTCTCCAACAACAACCTCGAAGGCAGAATCCCAACCGGCGGCCAATTCAGCGTCTTCTCCGGCCAGAGCTTCGCCGGAAACCCAAAACTCTGCTTCCCACAAGACCACTCCTGTAAATTACCCCAGAAGCCCCTCAAATCGACCAAAATCATTGTCATAACAATCTCCCTCCTCACCACACTCCTCCTCGTCCTCATCACAATCTACGCACTACGAAAACGAAAGCATCACAAATCCATGATCTGGAAGCTCACCTTATTCCGACGTCTGAACTTCAAAGTCGACGATGTCCTCGAATGCTTAAAGGAAGAGAACATAATCGGAAAAGGCGGCGCAGGGATCGTGTACAGAGGGTCCACCAGGGACGGCACCGAAGTGGCGATAAAGAGACTGGTGGGTCAGGGTCGGAGTGGCCGGAACGATTACGGATTCAAGGCGGAGATAGAGACGTTAGGGAGGATCAGACACAGGAACATAGTGAGGCTGTTAGGTTACGTATCGAACAAGGATACGAACTTGTTGGTTTATGAGTTTATGAGAAATGGAAGCTTAGGGGAATGGCTTCATGGAGCGAAAGGAGGGCATTTACAGTGGGAAGCGAGGTACAAGATCGCCGTCGAAGCCGCGAAGGGACTGTGTTATCTTCATCATGATTGCTCGCCGGGGATCATACATAGGGATGTGAAGTCGAATAATATATTGTTGGATGCAGATTTTGAAGCTCATGTTGCAGATTTTGGATTGGCCAAGTTTCTTCTTGATCCTGGCGCTTCTCAGTCTATGTCCTCCATTGCTGGTTCTTATGGATACATCGCCCCAGAGTACGCATACACACTGAAAGTCGACGAGAAGAGCGACGTGTACAGCTTCGGAGTGGTGCTGCTGGAGCTGATAGTGGGGAGGAAACCGGTGGGCGAGTTCGGCGACGGCGTGGACATTGTTGGGTGGGTGAAGAACACCACGTCGGAGCTTCCTCCTCCGCGGTCGGACGCCGCAACGGTGATGGCGGTGGTGGACCCTAGGCTATCAGGGTATCCTCTCACCGGCGTCATTCACACGTTCAAGATAGCGATGATGTGTGTGGAAGAGAAAGGTACCTCGAGGCCCACCATGAGACAAGTCGTTCATATGCTCACCAATATTAATCCCCCTCCTGATCTCATTCACCTCTAA 2925 0.4879 MRRSTLFSIPFLLSFLWYSSSLSSASSDLDALLKLKASLKGPKASPSAMEDWEPSVSLSAHCNFTGVSCDENFRVVSLNISFHPLFGSIPPEIGQMDKLVSLTLSQDNLTGELPKQLANLTSLQVLNISHNALTGDFPGEITLNMSELEVLDVYDNSFNGTLPEEVVKLKKLKQLWLAGNYFSGLIPESYSHFESLEILKLNENSLRGKIPASLANLKKLRELYLGYSNAYQGGVPPELGNMSTLQLIDLANCNLSGEIPPELGNLKKVHTLFLQMNNLTGEIPSELSGMTSLMSLDLSINSLTGEIPSSFSKLTNLTLINLYENKLRGPIPSFIGDLPNLEVLHVWENDFSFILPENLGSNGRFKKIDVTSNHFTGLVPKDLCKGGRLEIFILMNNSFDGPIPEQLGECMSLTKVRISNNFLSGSIPPGFFNLPSASMIDLSNNLLSGELPTDMSGDVLGILTLSYNSITGKIPPAIRKLRTLQNLQLDVNHFVGEIPKEMFDLPMLTKVNISFNNLSGPIPDSITHCASLTAVDLCRNKLVGEIPRAINNITDLSILNLSMNHLTGSIPDEIRYMVSLTTLDLSNNNLEGRIPTGGQFSVFSGQSFAGNPKLCFPQDHSCKLPQKPLKSTKIIVITISLLTTLLLVLITIYALRKRKHHKSMIWKLTLFRRLNFKVDDVLECLKEENIIGKGGAGIVYRGSTRDGTEVAIKRLVGQGRSGRNDYGFKAEIETLGRIRHRNIVRLLGYVSNKDTNLLVYEFMRNGSLGEWLHGAKGGHLQWEARYKIAVEAAKGLCYLHHDCSPGIIHRDVKSNNILLDADFEAHVADFGLAKFLLDPGASQSMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIVGRKPVGEFGDGVDIVGWVKNTTSELPPPRSDAATVMAVVDPRLSGYPLTGVIHTFKIAMMCVEEKGTSRPTMRQVVHMLTNINPPPDLIHL 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0253 974 Pfam Leucine rich repeat 292 347 IPR001611 GO:0005515
Lele09g0253 974 Pfam Leucine rich repeat 172 227 IPR001611 GO:0005515
Lele09g0253 974 Pfam Leucine rich repeat 531 590 IPR001611 GO:0005515
Lele09g0253 974 Gene3D Ribonuclease Inhibitor 388 623 IPR032675 -
Lele09g0253 974 Gene3D Phosphorylase Kinase; domain 1 651 762 - -
Lele09g0253 974 SMART LRR_typ_2 577 600 IPR003591 -
Lele09g0253 974 SMART LRR_typ_2 505 529 IPR003591 -
Lele09g0253 974 SMART LRR_typ_2 120 144 IPR003591 -
Lele09g0253 974 SMART LRR_typ_2 169 192 IPR003591 -
Lele09g0253 974 SMART LRR_typ_2 338 362 IPR003591 -
Lele09g0253 974 SMART LRR_typ_2 290 313 IPR003591 -
Lele09g0253 974 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 233 964 - -
Lele09g0253 974 Pfam Protein kinase domain 686 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0253 974 SUPERFAMILY RNI-like 77 400 - -
Lele09g0253 974 FunFam Leucine-rich repeat receptor-like kinase 27 144 - -
Lele09g0253 974 SUPERFAMILY Protein kinase-like (PK-like) 667 965 IPR011009 -
Lele09g0253 974 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Lele09g0253 974 SMART serkin_6 685 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0253 974 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 763 972 - -
Lele09g0253 974 Pfam Leucine rich repeat N-terminal domain 26 70 IPR013210 -
Lele09g0253 974 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 230 334 - -
Lele09g0253 974 Gene3D Ribonuclease Inhibitor 282 381 IPR032675 -
Lele09g0253 974 Gene3D Transferase(Phosphotransferase) domain 1 763 968 - -
Lele09g0253 974 ProSiteProfiles Protein kinase domain profile. 685 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0253 974 FunFam LRR receptor-like serine/threonine-protein kinase EFR 335 630 - -
Lele09g0253 974 SUPERFAMILY L domain-like 383 625 - -
Lele09g0253 974 Gene3D Ribonuclease Inhibitor 25 187 IPR032675 -
Lele09g0253 974 Gene3D Ribonuclease Inhibitor 188 281 IPR032675 -
Lele09g0253 974 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 145 229 - -
Lele09g0253 974 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 654 762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0253 Lele-ChrLele09 1800664 1804282 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0253 25 974 Receptor kinase-like Gene Family AT1G75820 62.890 0.0 1218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele09g0253 Pkinase 1e-42 CL0016