Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0243 ATGAAAGGCTATGCATATGGCCAGCTCATGAGTATCAATACAAATCTTTGCCTTAGAGGCTTCAAACATTCAACCATGGCTACCCTTATTTTTCCCATTAATCATTCTCCAGTTGAAGATGCAGAAGTTCTCCGAAAGTCTCTGGAAGGATGGGGGACTGATGAGAAGAGCATAATAACAATCCTGGGTCACAGAAACACTCACCAGCGGCAGCAGATCAGAAAGGCTTATGAGGAACTTTTCCAGGAGGATCTTGTCAAACGCTTTGAGAAGGAGATCTCCGGCGACTTGGAGAGGGCTGTGTATAGGTGGATTCTGGAACCGGCCGATCGCGATGCAGTGTTGGCCCATGTGGTCATCAAGGATGGGAAAAACTACAATGTGATTGCAGAGATTGCCACAGTGCTCTCCCCTGAAGAGCTGCTTGCCGTGAGGCGTGCCTACCTCCATCGCTACAAACACTCCTTGGAAGAAGATGTGGCTGCAACTACTTCAGGCCATCTTCGCCAGCTTTTGGTGGGGTTGGTGACCTCATATAGGTATGTTGGAGAAGAGATCAATGCAAGATTGGCACAATCTGAAGCTGAGATCCTTCATGAGGCTATCAAGGAGAAGAAAGGAAGCGAGGAAGAAGTCATTAGGATCTTGACCACAAGGAGCAAGACCCAGCTTGTTGCAACCTTCAATCGCTACAGAGAGGTCCATGGGACTTCCATCTCTAAGAAATTGGTGGATGAGACATCAGATGAGTTCCATAAGGCATTGTACACAGCCATCCGCTGCTTCAATGACCACACCAAGTACTATGAAAAGGTGGTGCGCAATGCGATACAGAAGAGGGGAACTGATGAGGATGCACTGACCCGTGTGATCGTGAGCAGGGCAGAAAAGGACATGAGGGAAATCAAAGATCTGTATTACAAGAGGAACAGTGTTAATCTTGAACAGGCTGTGGCCAAGGAGATCTCAGGAGACTACAAGAACTTCCTCCTCACTCTCTTGGGGAAGGAAGATTAA 1017 0.4759 MKGYAYGQLMSINTNLCLRGFKHSTMATLIFPINHSPVEDAEVLRKSLEGWGTDEKSIITILGHRNTHQRQQIRKAYEELFQEDLVKRFEKEISGDLERAVYRWILEPADRDAVLAHVVIKDGKNYNVIAEIATVLSPEELLAVRRAYLHRYKHSLEEDVAATTSGHLRQLLVGLVTSYRYVGEEINARLAQSEAEILHEAIKEKKGSEEEVIRILTTRSKTQLVATFNRYREVHGTSISKKLVDETSDEFHKALYTAIRCFNDHTKYYEKVVRNAIQKRGTDEDALTRVIVSRAEKDMREIKDLYYKRNSVNLEQAVAKEISGDYKNFLLTLLGKED 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0243 338 Gene3D Annexin 266 336 IPR037104 GO:0005509|GO:0005544
Lele09g0243 338 PANTHER ANNEXIN 34 333 - -
Lele09g0243 338 ProSiteProfiles Annexin repeat profile. 189 260 IPR018502 GO:0005509|GO:0005544
Lele09g0243 338 Gene3D Annexin 20 106 IPR037104 GO:0005509|GO:0005544
Lele09g0243 338 ProSiteProfiles Annexin repeat profile. 35 106 IPR018502 GO:0005509|GO:0005544
Lele09g0243 338 SUPERFAMILY Annexin 28 338 IPR037104 GO:0005509|GO:0005544
Lele09g0243 338 Gene3D Annexin 107 176 IPR037104 GO:0005509|GO:0005544
Lele09g0243 338 ProSitePatterns Annexin repeat signature. 281 333 IPR018252 GO:0005509|GO:0005544
Lele09g0243 338 FunFam Annexin 189 263 - -
Lele09g0243 338 ProSiteProfiles Annexin repeat profile. 107 177 IPR018502 GO:0005509|GO:0005544
Lele09g0243 338 SMART annex3 207 258 IPR018502 GO:0005509|GO:0005544
Lele09g0243 338 SMART annex3 281 333 IPR018502 GO:0005509|GO:0005544
Lele09g0243 338 SMART annex3 52 104 IPR018502 GO:0005509|GO:0005544
Lele09g0243 338 SMART annex3 123 175 IPR018502 GO:0005509|GO:0005544
Lele09g0243 338 ProSiteProfiles Annexin repeat profile. 264 335 IPR018502 GO:0005509|GO:0005544
Lele09g0243 338 PRINTS Annexin family signature 277 297 IPR001464 GO:0005509|GO:0005544
Lele09g0243 338 PRINTS Annexin family signature 197 223 IPR001464 GO:0005509|GO:0005544
Lele09g0243 338 PRINTS Annexin family signature 49 71 IPR001464 GO:0005509|GO:0005544
Lele09g0243 338 PRINTS Annexin family signature 89 105 IPR001464 GO:0005509|GO:0005544
Lele09g0243 338 PRINTS Annexin family signature 321 334 IPR001464 GO:0005509|GO:0005544
Lele09g0243 338 FunFam Annexin 265 336 - -
Lele09g0243 338 FunFam Annexin 107 176 - -
Lele09g0243 338 Pfam Annexin 40 101 IPR018502 GO:0005509|GO:0005544
Lele09g0243 338 Pfam Annexin 121 175 IPR018502 GO:0005509|GO:0005544
Lele09g0243 338 Pfam Annexin 194 255 IPR018502 GO:0005509|GO:0005544
Lele09g0243 338 Pfam Annexin 272 333 IPR018502 GO:0005509|GO:0005544
Lele09g0243 338 Gene3D Annexin 189 262 IPR037104 GO:0005509|GO:0005544
Lele09g0243 338 FunFam Annexin 26 106 - -
Lele09g0243 338 PRINTS Plant annexin signature 184 204 IPR009118 -
Lele09g0243 338 PRINTS Plant annexin signature 142 156 IPR009118 -
Lele09g0243 338 PRINTS Plant annexin signature 249 267 IPR009118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0243 Lele-ChrLele09 1750643 1753958 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1309 29 19693263 19696782 Lele09g0243 09 1750643 1753958 CCT
Lele09g0243 09 1750643 1753958 Lele09g0243 09 1750643 1753958 ECH
Lele09g0243 09 1750643 1753958 Lele11g0247 11 2740721 2742503 hybridization
Lele09g0243 09 1750643 1753958 Lele12g1026 12 17818630 17820795 hybridization