Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0215 ATGGATGCTAAGCGACGAACGGTTCGCTCCTTTGTGTTGAAGCTGAGCTCTGTTTCGGAGCAAACCCAGCTCGATGCTCTCCGCGAGCTTCGCTTGATGACCAAGCAGGATGAAGAAACCCGAGCCGTGATCGCTGATTCGGGTGCGATTCCGTACTTGGTTGATACCCTCTTCTCGCCTTCCCACGTTTTCCAAGACAACGCCTCTGCAACGCTTCTCAACATTTCGATTTCCTGTAGAGAGCCTCTTATGTCCACGCGCGGAGTCCTCGATGCTATCTCGCACGTGCTTTCCCGCCATAACTCGACTTCGTCTCCTTCCGCCGTCCAATCCGGCGCCGCCACGTTGTACAGCCTCCTCCTCGTCGATAACTACAGGCCTATCGTCGGTTCCAAGCGAGACATTGTGTACGCGCTCGTCGATATCATCAAAACCCCCAAATCGCCGATGAGATCGATCAAGGACGCCCTCAAGGCTATGTTCGGAATCGCTCTTCATCCGCTTAATCGGTGCACCATGATCCAACTCGGTGCGGTTGAAGCTCTGTTCTCGTTGGTTCTGAAGGACCGGAAGGTCGTCGGGATTGTGGAGGATGCGACGGCGGTGATAGCGCAAATCGCGGGCTGCGAAGAGAGTGTGGAAGCGTTTCGGAAGGTGTCAGGAATCGGAGTGCTGGTTGATTTTCTGGATATGGCGAATAAGTCAAGCATGAAGACGAAGGAGAATGCTATTTCTGGATTACTGAAGCTAGTGAGATGTGGAGGGGAGAGAGTAGCCATGGATGTGAGAGTGAGAGCTTTAGGGGCATTTGATGGAATCGCGGACGTTCAAGAGAAAGGTAGCTCCAAAGGGAAGAGCAAGGCGGCGGCATTATCAGCGGAATTAATGGGAGATGGAAGCCATGGGATTACACAGAGGGATTCGCGGTTTGATTCCTCAACGAGTCAAGATTCATCATTTTCATTCAATTTATCAACAGATTCATCAGAATTTAGTGTCTAG 1002 0.517 MDAKRRTVRSFVLKLSSVSEQTQLDALRELRLMTKQDEETRAVIADSGAIPYLVDTLFSPSHVFQDNASATLLNISISCREPLMSTRGVLDAISHVLSRHNSTSSPSAVQSGAATLYSLLLVDNYRPIVGSKRDIVYALVDIIKTPKSPMRSIKDALKAMFGIALHPLNRCTMIQLGAVEALFSLVLKDRKVVGIVEDATAVIAQIAGCEESVEAFRKVSGIGVLVDFLDMANKSSMKTKENAISGLLKLVRCGGERVAMDVRVRALGAFDGIADVQEKGSSKGKSKAAALSAELMGDGSHGITQRDSRFDSSTSQDSSFSFNLSTDSSEFSV 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0215 333 MobiDBLite consensus disorder prediction 298 333 - -
Lele09g0215 333 SUPERFAMILY ARM repeat 11 276 IPR016024 -
Lele09g0215 333 MobiDBLite consensus disorder prediction 306 333 - -
Lele09g0215 333 SMART arm_5 209 252 IPR000225 GO:0005515
Lele09g0215 333 SMART arm_5 37 77 IPR000225 GO:0005515
Lele09g0215 333 SMART arm_5 166 208 IPR000225 GO:0005515
Lele09g0215 333 Gene3D - 3 306 IPR011989 -
Lele09g0215 333 PANTHER U BOX DOMAIN-CONTAINING 7 305 - -
Lele09g0215 333 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 177 221 IPR000225 GO:0005515
Lele09g0215 333 FunFam ARM repeat superfamily protein 2 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0215 Lele-ChrLele09 1518412 1519413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0215 8 291 U-box Gene Family AT2G23140 33.101 4.09e-31 121