Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0198 ATGGCTTCCAGCATTAATCAAGAACCGGAAGCTTACATAGTTGAAGAAGAAATTGAAGAAGAAGAAATTGAAGAAGAAGAAGATGACGATGGAGAGCCCGAAGGTTGGGATGACTGGAACGGGGATGATGATGAAGGAGGAGAGGGAGGCTCAGGATCGGGTTTTCTCTGTCTCTTCTGTGATTCCAAGTACAGTTCGTGCGATTCCTTGTTTGAGCACTGCGCCAAAGTTCACTACTTTGATTTTCATCGCATTAGGAAAGCTCTTAGCTTGGATTTTTATGGCTCTTTCAAGCTCATTAATTACATACGCTCACAGGTAGCGGATAACAAATGTTGGAGCTGTGGATTGACATTCCAGTCCAACAAAGATTTACAGAATCATTTGCATGACACAGTAAACTTGAAGGATGTTAAGTGTCTATGGGATGACGAGAGATATCTAAAACCTTTCATACAAGATGATTCGTTGCTGTACAGTTTCGATGAATCTGAAGAAATTGAAGATGATCAGTTTACACCAATTAATGAAGAGGATCTAGTGGGGGATTTGAAGAACTCTGAAGAGATTTGTGGTGATGATCAAAATACTGTCGAAAAGACGGTACTTAATGGAACTACTATTTCTGTTAATGATATTAACAGTCCTAGTTCATCAGACAAGGATCTTATTAATGATAAGGACTCAAGAGGGTTTGTTTCATCAAATGAAAAGAATCAAGAAGGACATTTGATACCTAACTCTTCAAGTCGTCTTGCAAAGCACATCATGAAGGTCAATGAAAATTATTTTGGAGCTTATAGTTCATTTGGCATACATCGTGAGATGCTGAGTGATAAGGTGAGAATGGATGCATATGGGACAGCTATTTTGAAGAACCCCTCTCTCCTAAAGGGTGCTGTAGTTATGGATGTAGGTTGCGGAACTGGAATCCTTAGTCTATTTGCAGCTCAAGTAGGGGCTTCAAGGGTGATTGCAATTGAGGCTAGTGCCAAGATGGCAGCAGTGGCGTCTAAGGTTGCAAATGATAATGGTCTTTTGCATGGTAAAAACGAAAGTCAAGCTGATGGCCTCCAGAAGGGAGTAATGGAAGTGGTCCAGGGTATGGTTGAAGAGGTTGATAAAAACGTTGAACTTCAACCTCACAGTGTTGATGTATTATTAAGTGAATGGATGGGATATTGCCTGCTGTATGAGTCTATGCTCAGCTCAGTCCTCTATGCACGGGACCGGTGGTTGAAGCCTGGAGGGGCCATTCTTCCTGATACAGCAACTATTTTTGTTGCGGGTTTTGGAAAAGGGGGTACGAGTCTTCCTTTCTGGGAAAACGTGTGTGGTTTTGACATGTCTTGCATTGGCAAGGAGTTGGTGAATAATGCTGCCCGATTTCCAATAGTTGATGTTTTGGACTCTGAAGATTTGGTCACCAAATCTGCGATTCTTCAGACTTTTGACTTGGCAACTATGAAGCCTAATGAAGTGGATTTCACTGCAACTGCTACTTTGGAGCCGATGTTGAATGATACAGACACAAAACATTTAGATTCAAAAACAGGATGCCGCTGGTGTTATGGAGTTGTCCTGTGGTTTGAAACTGGATTTACAAGCAGGTTCTGCCGAGAAGCACCAGCCGTGTTGTCGACATCTCCATACACGCCAAAAACACATTGGTCGCAAACCATCTTAACCTTTCGGGAGCCCATTGCCATGGGATCCGAAAAAGCTACTGGAGGTTTAGTGGCAGCAATTGGCACTGATGTTTATCCAGCTGCAAAGATCGATTTGCGCGTTAGTATTGTCCGATCGACAGAGCACCGCAGCATTGACATTTCGTTAGAAGCTGTTGGGGTCGGCCCTGATGGTCGAAGACGCAGTTGGCCTGCACAACTCTTTAGTCTGCAGTAG 1905 0.4299 MASSINQEPEAYIVEEEIEEEEIEEEEDDDGEPEGWDDWNGDDDEGGEGGSGSGFLCLFCDSKYSSCDSLFEHCAKVHYFDFHRIRKALSLDFYGSFKLINYIRSQVADNKCWSCGLTFQSNKDLQNHLHDTVNLKDVKCLWDDERYLKPFIQDDSLLYSFDESEEIEDDQFTPINEEDLVGDLKNSEEICGDDQNTVEKTVLNGTTISVNDINSPSSSDKDLINDKDSRGFVSSNEKNQEGHLIPNSSSRLAKHIMKVNENYFGAYSSFGIHREMLSDKVRMDAYGTAILKNPSLLKGAVVMDVGCGTGILSLFAAQVGASRVIAIEASAKMAAVASKVANDNGLLHGKNESQADGLQKGVMEVVQGMVEEVDKNVELQPHSVDVLLSEWMGYCLLYESMLSSVLYARDRWLKPGGAILPDTATIFVAGFGKGGTSLPFWENVCGFDMSCIGKELVNNAARFPIVDVLDSEDLVTKSAILQTFDLATMKPNEVDFTATATLEPMLNDTDTKHLDSKTGCRWCYGVVLWFETGFTSRFCREAPAVLSTSPYTPKTHWSQTILTFREPIAMGSEKATGGLVAAIGTDVYPAAKIDLRVSIVRSTEHRSIDISLEAVGVGPDGRRRSWPAQLFSLQ 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0198 634 SUPERFAMILY beta-beta-alpha zinc fingers 32 166 IPR036236 -
Lele09g0198 634 Pfam C2H2 type zinc-finger (2 copies) 57 131 IPR041661 -
Lele09g0198 634 Gene3D - 424 625 - -
Lele09g0198 634 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 260 602 IPR025799 GO:0016274|GO:0018216
Lele09g0198 634 MobiDBLite consensus disorder prediction 12 45 - -
Lele09g0198 634 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 58 614 IPR025799 GO:0016274|GO:0018216
Lele09g0198 634 FunFam Protein arginine N-methyltransferase 6 256 421 - -
Lele09g0198 634 Gene3D Vaccinia Virus protein VP39 252 421 IPR029063 -
Lele09g0198 634 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 267 572 IPR029063 -
Lele09g0198 634 MobiDBLite consensus disorder prediction 1 48 - -
Lele09g0198 634 ProSitePatterns Zinc finger C2H2 type domain signature. 57 78 IPR013087 -
Lele09g0198 634 Pfam Methyltransferase domain 302 417 IPR041698 -
Lele09g0198 634 CDD AdoMet_MTases 302 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0198 Lele-ChrLele09 1397124 1400603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0198 11 633 C2H2 Transcription Factor Family AT3G12270 56.056 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele09g0198 Methyltransf_25 7.5e-09 CL0063