Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0166 ATGAGTCTAATGATACATGACATTGAAGATGGGGAGCTCCCTAGTGATCAGAACGGGCCACAGTTGAATGATGAGGTTAATGGAGGAAGTGCCAGTGGTGTTATTCTGAAGAAAGGTCCTTGGACATCTGCCGAAGATGCTATTTTGGTGGACTATGTTAAGAAGCACGGGGAAGGGAACTGGAATGCTGTTCAGAAGCACTCAGGTCTGTCCCGTTGCGGCAAAAGCTGCCGACTGCGGTGGGCAAATCACCTAAGGCCAAATTTAAAGAAAGGAGCTTTTACTGCAGAAGAAGAGAGGTTGATTGCTGAACTCCATGCCAAGATGGGAAACAAATGGGCACGCATGGCTGCACATCTGCCTGGTCGTACTGATAATGAGATAAAGAACTACTGGAATACTCGTATAAAGAGGCGTCAGCGGGCTGGCTTGCCTCTATATCCGCCTGAAGTGTGTTTACAAGAATCTAAAGAGAGTCAACAAAGCCGAAGCACTGCTGGAAAAATTGGAGATAGAGGAAATAATGATTTTCTTCGGGAAAACAGTTATCAGAAACATGATACTCTATTTGACAGTCTGAATGCAAATCAGGGAGGCTTTCCTTATGTGCCAGAGATTCCTGACATTAGTGCTAATAACATTCTGCTGAAAGGTCTTGGTTCTTCCCAGCATTGTAATCTTTTGCCATCAACATTACCTTACCATAAGCGCTTTCAGGATTCAACAATGCCATTTCCTAGTTCATCTGATGTGACCAGAAATGGGTTTTATCCTTTACACCATATTCAGGATTATACTTATGATAAGATTGCGCAATCATTTGGATACCATTCTCCCCTTGATCCTGGTCCCTCCTCACAGAATTCACTGTGTTACAGCCATTCGCTTTCAAATGGCAATTCCTCCTCTACTTCTAAGCCAACTTTTGAGGCTTTGAAGCTGGAGCTCCCTTCACTCCAATATCCAGAAACTGATTTAGGCTGCTGGGGTACATCTCCTCCGCCTCTTTTGCTAGAATCAGTTGATGTTCTCACAGGTACTCCCCTGCCAACTAGTTTACTGGAGTCAGATTCTTCTTCACCATATAACAGTGGCCTCCTGGATGCTTTACTTCATCAGTCCAAGAATCTGAGCAGTTCAAAGAACCATTGTTCTGATAAGAGTTCAAATTCATCTACCGCTACCCCTGGTGATAGAGCCGGCAGTTCCACTCTGTATGCGTATGAGACAGAATGTGAAGACTATGCAGACTGTGTTTCTCCATTTGGTGCAACTTCAATATTGAATGAATGTCTTGCTGTTAGTGCCAACGGAAATTCATTTGATGAACTGCAACCTGCACAGACCTTAAATGAAAACACTCTGAAATCAGAATCTGCTTACAACGCTTTGACTCCCAACAGTGAAGATCAAGACGTGTCAATGTTGGATATGCCCAGACCTGATGTTTTGCTTGCTTCAGATTGGTATGAGCAAGGCCCTGCATTTACCAAGGACCAGGCCAACATGAACAATTCCATAGCAACCCTCATCGGTGGTGATGATTCAGCCACCGACTACAAGTACATATCTGCGGAAATCTCATCACCTAGTCAAGTGTGGGGGGATTCTTGCACTTGGAATTACATGCCTGCTGTTTTCCAAATGTCTGATCTTCCGTAA 1662 0.441 MSLMIHDIEDGELPSDQNGPQLNDEVNGGSASGVILKKGPWTSAEDAILVDYVKKHGEGNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFTAEEERLIAELHAKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEVCLQESKESQQSRSTAGKIGDRGNNDFLRENSYQKHDTLFDSLNANQGGFPYVPEIPDISANNILLKGLGSSQHCNLLPSTLPYHKRFQDSTMPFPSSSDVTRNGFYPLHHIQDYTYDKIAQSFGYHSPLDPGPSSQNSLCYSHSLSNGNSSSTSKPTFEALKLELPSLQYPETDLGCWGTSPPPLLLESVDVLTGTPLPTSLLESDSSSPYNSGLLDALLHQSKNLSSSKNHCSDKSSNSSTATPGDRAGSSTLYAYETECEDYADCVSPFGATSILNECLAVSANGNSFDELQPAQTLNENTLKSESAYNALTPNSEDQDVSMLDMPRPDVLLASDWYEQGPAFTKDQANMNNSIATLIGGDDSATDYKYISAEISSPSQVWGDSCTWNYMPAVFQMSDLP 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0166 553 ProSiteProfiles Myb-like domain profile. 36 85 IPR001005 -
Lele09g0166 553 CDD SANT 93 134 IPR001005 -
Lele09g0166 553 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 85 IPR017930 -
Lele09g0166 553 MobiDBLite consensus disorder prediction 287 306 - -
Lele09g0166 553 MobiDBLite consensus disorder prediction 378 401 - -
Lele09g0166 553 Gene3D - 37 90 - -
Lele09g0166 553 MobiDBLite consensus disorder prediction 154 169 - -
Lele09g0166 553 MobiDBLite consensus disorder prediction 1 29 - -
Lele09g0166 553 Gene3D - 93 139 - -
Lele09g0166 553 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 140 IPR017930 -
Lele09g0166 553 FunFam Transcription factor GAMYB 93 139 - -
Lele09g0166 553 Pfam Myb-like DNA-binding domain 91 134 IPR001005 -
Lele09g0166 553 Pfam Myb-like DNA-binding domain 38 85 IPR001005 -
Lele09g0166 553 MobiDBLite consensus disorder prediction 154 178 - -
Lele09g0166 553 FunFam MYB-related transcription factor 37 90 - -
Lele09g0166 553 ProSiteProfiles Myb-like domain profile. 86 136 IPR001005 -
Lele09g0166 553 CDD SANT 40 85 IPR001005 -
Lele09g0166 553 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 24 510 - -
Lele09g0166 553 SMART sant 37 87 IPR001005 -
Lele09g0166 553 SMART sant 90 138 IPR001005 -
Lele09g0166 553 MobiDBLite consensus disorder prediction 378 400 - -
Lele09g0166 553 SUPERFAMILY Homeodomain-like 37 132 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0166 Lele-ChrLele09 1197903 1201347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0166 7 549 MYB Transcription Factor Family AT3G11440 41.947 1.03e-117 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele09g0166 Myb_DNA-binding 5.1e-15 CL0123