Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0150 ATGTCTTCCTATGGCAAGCTCGACGAATCTGAGCAAGAAAAGCTCGTAGCTCGCCGGAAAACCCGGAGGCGAATCGCCATCATGAGCTTGTCAGCTGTTGTCCTGGTCGGCGTTGTTGTGGCGGCGGTCTTAGGAACAAGTCTGGCTCACAACAACAGCACTAGTAGCAATAATGTCGATGTTTCGGCTTCGGTGAAAGCTGTGTGTGATGTGACATTGTACAAGGATGCTTGTTATGGCAGCCTGGGACGTGCGGTTCAACGAGGACGGTTGATTAAGCCTGAGGATTTGTTCAGGCTGTCTCTTCAAGTTGCATTGAATGAAGTTTCTGATGCTGCTGATAAGTATTTTTATGGTGAAAAGGGAGGTTTTGGGGATTTGATTGGTGATGATAATAGAACCATAAAAGCTTTCAGTAATTGCAAGGAGCTCTTGGATCTTGCTATTGATCATCTCAATATCTCATTGTCTTCTGGCCAGAATATTTCTTCTGTTCTTGAGATTTTTGAAGATCTTCAAACAGGGTTGAGTGCTTCAGGTACCAATCTTAATTCCGTCACTTCTCATAGTGCTGAAACTTACCAACAAACATGCATAGATGGCTTAGAGGAATCAAAAGAATCAGTAAAGAACAGAGTTAGAAGATACCTCAAGAACTCTACAGAATTCACCAGCAACAGTCTTGCCATTATCACTTGGATTAAGCAAGCTGCAAGCACACTAAACTTGAAACGACGACGCTTATTGACCCTACCAGCATGGCTTCATGAGAAAGACAGAAAGCTGCTTGCATCATCAGACAAGGACTTGAAGAAGAAAGCAGACATTGTCGTGGCAAAAGATGGTTCTGGAAAATACAGAACAATCTCCGAGGCACTCAAGCATGTCCCTGAAAAGAGCAAGAAGAGAACTGTGATCTATGTGAAGAAAGGAGTTTACTTTGAGAATGTTAGAGTTGAGAAGAAAAAATGGAATGTCATGATGATTGGTGATGGAATGAACACAACAATTGTGTCTGGTCGTCTCAACTTTGTCGATGGCACTCCCACTTTCTCATCTGCAACATTTGCTGTTTTTGGGAAGAACTTCATGGCAAGGGACATGGGATTTCGCAACACGGCAGGGCCAGAGAAGCACCAAGCAGTGGCGCTGATGACAAGTGCCGATCAGGCTGTGTACTACAGATGCCACATCGATGCATTTCAAGACACTCTCTATGCTCATGCACATCGCCAGTTCTATAGAGAATGCAATATCTATGGCACTGTTGATTTCATCTTTGGCAACTCTGCTGTTGTCATTCAAAACTCCAACATCTTCCCAAAGGTACCTATGCTGGGCCAGAAGAACACAATCACAGCACAAGGGAAGATAGACCCAAATATGAATACAGGGATTTCAATTCAGAATTGCAAGATCTCACCCTTTGGCAACTTGAGTTCTGTGCAAACATATCTTGGAAGGCCATGGAAGAACTACTCAACCACTGTGTTCATGCAATCTTCAATGGGAAACTTAATTGATCTTAGGGGCTGGTTGCCATGGGTAGGAAACTCAGCACCAGACACCATTTTCTATGTTGAGTTTCAGAACTTTGGACCTGGTGCTTCCACAAAAGCTAGGGTCAAATGGAAGGGCTTAAGAACAATTTCTGCTAAACAAGCTAATAGATTCACAGTCAAGGCCTTTCTTCAAGGAGACCGATGGATTCCAGCCACAAGCACCCCTTACAAGTCTTCTCTGTGA 1746 0.4376 MSSYGKLDESEQEKLVARRKTRRRIAIMSLSAVVLVGVVVAAVLGTSLAHNNSTSSNNVDVSASVKAVCDVTLYKDACYGSLGRAVQRGRLIKPEDLFRLSLQVALNEVSDAADKYFYGEKGGFGDLIGDDNRTIKAFSNCKELLDLAIDHLNISLSSGQNISSVLEIFEDLQTGLSASGTNLNSVTSHSAETYQQTCIDGLEESKESVKNRVRRYLKNSTEFTSNSLAIITWIKQAASTLNLKRRRLLTLPAWLHEKDRKLLASSDKDLKKKADIVVAKDGSGKYRTISEALKHVPEKSKKRTVIYVKKGVYFENVRVEKKKWNVMMIGDGMNTTIVSGRLNFVDGTPTFSSATFAVFGKNFMARDMGFRNTAGPEKHQAVALMTSADQAVYYRCHIDAFQDTLYAHAHRQFYRECNIYGTVDFIFGNSAVVIQNSNIFPKVPMLGQKNTITAQGKIDPNMNTGISIQNCKISPFGNLSSVQTYLGRPWKNYSTTVFMQSSMGNLIDLRGWLPWVGNSAPDTIFYVEFQNFGPGASTKARVKWKGLRTISAKQANRFTVKAFLQGDRWIPATSTPYKSSL 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0150 581 Coils Coil 199 219 - -
Lele09g0150 581 Pfam Pectinesterase 275 567 IPR000070 GO:0030599|GO:0042545
Lele09g0150 581 TIGRFAM PME_inhib: pectinesterase inhibitor domain 38 234 IPR006501 GO:0004857
Lele09g0150 581 Gene3D Invertase/pectin methylesterase inhibitor family protein 62 235 IPR035513 -
Lele09g0150 581 Gene3D - 270 581 IPR012334 -
Lele09g0150 581 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 64 234 IPR035513 -
Lele09g0150 581 SMART PMEI_2 60 230 IPR006501 GO:0004857
Lele09g0150 581 FunFam Pectinesterase 269 581 - -
Lele09g0150 581 Pfam Plant invertase/pectin methylesterase inhibitor 64 230 IPR006501 GO:0004857
Lele09g0150 581 SUPERFAMILY Pectin lyase-like 273 577 IPR011050 -
Lele09g0150 581 FunFam Pectinesterase 61 235 - -
Lele09g0150 581 CDD PMEI-like_3 67 234 - -
Lele09g0150 581 PANTHER PECTINESTERASE 36 573 - -
Lele09g0150 581 ProSitePatterns Pectinesterase signature 2. 419 428 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0150 Lele-ChrLele09 1038055 1040951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0150 2 581 Carbohydrate Esterase AT3G10710 57.411 0.0 666