Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0149 ATGTCCCCATCCTCCAATCTTCCTCTTCTCTTCTTTCTCTTCCTCTTTCTTCCATTACTCCTCCCCGCCCAACCTCCTCCACCACAGTCTCCTCCGCCGTCTCCCTCTTCTCTCTGCAAGTTCACATTGTACCCTAAACTATGCCGTTCCATGCTCTCCGTCATCTCCTCCTCCCACTCCCCCTCCGACCCCTACAATGCCGGCAAGTTCTCCGTCAAACAGAGCCTCAAGCAAGCCAAGAAACTCCTCAAGGTCTTCGACGACTTCCTCCGCAGCCGCCGCCACTCTCAATCCTCCCCGGAGGTTCGCGCCCTCGACGACTGCCGTGACCTCAGCCTCCTCAACCTCGAATACTTGGAAGCCGTCGCCGCCGACCTCCAAACAGCCCCAACAGCCTCCACCGAGCTGACAGACAAGGTCGAGAGCTACCTTAGCGCAGTGGCGACCAACCACTACACGTGCTACGACGGGCTTGTAGCGGTGAACAGTAACATTGGGAAGGTGCTGGCGGTGGCGTTGAGGAATGTGACGGAGGTGTATAGTGTATCGTTAGGGTTGGTGAGTGAGGCTTTGAATCAGAATTTGAAGAACAAGTTCAAGACTCGCAAGCATGGACTTCCATCTCAGTCTTACAAAGTCAGGCAGCCTCTTGCGAAACTCATCCAGGTTCTTCATCAGGAGTACAGTTGCAAGGCATCATCAAACTGCACAACCAGAAGTGAGAGGATTATTCACAGGGAAAGTGAAAGCAAAGGGATTCTATTAAACGGCTATGCAATAGTGAGCCATTATGGGACTGATAACTTCACTTCCATTGGAGAAGCCATTGCTGCTGCACCTACAAACCTGAGCCCAGAAGATGGCTACTTCCTTATCTACGTCAGAGAAGGATACTATGAAGAATATGTGATTGTTCCTAAACACAAGAAGAATATCTTGCTCATTGGTGATGGTATCAAGCAGACCATCATCACTGGCAATCACAGTGTCATTGATGGTTGGACAACCTTCAATTCTTCCACCTTTGCCGTTTCTGGAGAAAGATTCATAGCAGTGGATATCACATTCAGGAACACAGCAGGTCCAGCGAAGCACCAGGCAGTAGCAGTGAGGAACAACGCAGATCTCTCGACCTTTTATCGATGCAGCTTTGAAGGATACCAAGACACACTCTATGCTCACTCACTGAGGCAATTCTACAGAGAATGTGAGATTTATGGCACAGTAGACTTCATATTTGGCAATGCAGCTGTTGTATTCCAAGGCTGCAAGATGTATGCCAGGAAGCCACTTCCATTCCAGAAGAATGCCATCACAGCACAAGGCAGAACCGACCCGAACCAGAACACTGGAATCTCAATCCAGAATTGCACCATTGAAGCAGCACAGGATTTAGCTTCAGATTTGAACTCTACTACTACTAATACGACTGACTTGACCTACTTGGGAAGGCCATGGAAGTTATATTCTAGAACTGTGTACATGGAGTCTTATATTGGGGATGTGATTCAACCTTCTGGTTGGTTAGAGTGGAATGGGACTATAGGGTTGGACACTTTGTTTTATGGTGAGTTCAATAATTATGGACCTAGGGCTAATACCAGAAATAGGGTTCAATGGCCTGGTTTTAATCTTCTGAATGCTACTCAGGCTTTGAACTTCACTGTCCTCAATTTTACACTGGGAGATACATGGCTTCCTGATACAGATATACCATACTCTGCAGGATTACTAGAACATTAG 1743 0.4785 MSPSSNLPLLFFLFLFLPLLLPAQPPPPQSPPPSPSSLCKFTLYPKLCRSMLSVISSSHSPSDPYNAGKFSVKQSLKQAKKLLKVFDDFLRSRRHSQSSPEVRALDDCRDLSLLNLEYLEAVAADLQTAPTASTELTDKVESYLSAVATNHYTCYDGLVAVNSNIGKVLAVALRNVTEVYSVSLGLVSEALNQNLKNKFKTRKHGLPSQSYKVRQPLAKLIQVLHQEYSCKASSNCTTRSERIIHRESESKGILLNGYAIVSHYGTDNFTSIGEAIAAAPTNLSPEDGYFLIYVREGYYEEYVIVPKHKKNILLIGDGIKQTIITGNHSVIDGWTTFNSSTFAVSGERFIAVDITFRNTAGPAKHQAVAVRNNADLSTFYRCSFEGYQDTLYAHSLRQFYRECEIYGTVDFIFGNAAVVFQGCKMYARKPLPFQKNAITAQGRTDPNQNTGISIQNCTIEAAQDLASDLNSTTTNTTDLTYLGRPWKLYSRTVYMESYIGDVIQPSGWLEWNGTIGLDTLFYGEFNNYGPRANTRNRVQWPGFNLLNATQALNFTVLNFTLGDTWLPDTDIPYSAGLLEH 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0149 580 FunFam Pectinesterase 254 577 - -
Lele09g0149 580 PANTHER PECTINESTERASE 20 567 - -
Lele09g0149 580 SUPERFAMILY Pectin lyase-like 257 576 IPR011050 -
Lele09g0149 580 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 190 IPR035513 -
Lele09g0149 580 Pfam Plant invertase/pectin methylesterase inhibitor 36 185 IPR006501 GO:0004857
Lele09g0149 580 ProSitePatterns Pectinesterase signature 2. 405 414 IPR033131 -
Lele09g0149 580 CDD PMEI-like_3 39 189 - -
Lele09g0149 580 Pfam Pectinesterase 259 562 IPR000070 GO:0030599|GO:0042545
Lele09g0149 580 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 188 IPR035513 -
Lele09g0149 580 Gene3D - 258 579 IPR012334 -
Lele09g0149 580 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 187 IPR006501 GO:0004857
Lele09g0149 580 SMART PMEI_2 30 186 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0149 Lele-ChrLele09 1032328 1037626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0149 4 578 Carbohydrate Esterase AT3G10720 54.604 0.0 662