Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0138 ATGGGGATGGAAACCAGAAAGCTCTCAGATGAATATGAAGTTTCAGAGATCTTAGGAAGAGGAGGGTTTTCTGTTATCAGAAAAGGCATTAAAAAATCAGGCAGTGGAAAAGCCCATGTAGCCATAAAAACACTCAGAAGAGTAGGTACCTCTGAAACTTTTGTATTTCCAAAAACCCAGAAAGGTAATAATAATAAGAGCATAGCTTCCGTGGGGTTCCCAACAACATGGAGACACGTTTCACTATCAGATGCTTTACTCACCAATGAGATCTTGGTCATGAGGAAGATAGTAGAGAACGTTTCACCTCATCCAAATGTGATTGACCTCTATGATGTCTATGAGGACTCAAATGGAGTTCATCTCGTTCTCGAGCTTTGTTCCGGCGGTGAGCTGTTTGATCGGATTGTGGCTCAAGAGAAGTACTCAGAGGCAGAAGCTGCAGCTGTAATTCATCAGATAGCAAAAGGATTAGAGGCAATTCACAGAGCTAATATTGTGCACAGGGACTTGAAGCCTGAGAATTGCTTGTTCCTGGACAGTAGAAAGGATTCTCCTATGAAGATCATGGACTTTGGGTTGAGTTCTGTGGAGGAATTTACTGACCCAGTTGCTGGCTTGTTTGGATCCATTGATTATGTTTCACCAGAAGCTCTTTTTCAAGGAAAAATTACTAATAGGAGTGACATGTGGTCTGTTGGGGTGATTTTTTATATCTTGCTCTCTGGGTATCCGCCTTTCATTGTTCAGAATAATCGCCAAAAGCAACAAATGATCATGACTGGGAGTTTCAGTTTCTATGAGAAGACTTGGAAGACCATTTCCTCCTCAGCAAAGCAATTGATTTCAAGTCTCCTAGCCGTTGATCCTCATAGGAGACCTAGTGCTCAAGAGTTTCTCACTCATCCATGGGTCAGAGGAGAAATAGCTAAAGGTGATCAGATGGATCCTGAGATTGTTGACAGATTGCAAAAATTCAATGCTCGTCGCAAACTCCGCGCTGCTGCAATTGCTAGTTTATGGAGCAGCACAGTCTTCTTGAGAATCAAAAACTTGAAATCCTTGTTGGGTCCTATGATCTTACACAGGAGGAAATTGAAAATCTCAAGATACACTTCAAGAAAATATGGAGACAATGCTACTCTCCCTGAATTTGAGGAGGTGCTAAAAGCAATGAATATGTCATCACTTATTCCTCTGGCAACGCGCATATTTGACATATTTGACAACAATCAAGATGGAACCGTTGACCTGCGTGAGATACTCTGTGGATTTTCCAGCCTTAAGAATTCCAAGGGAGATGATGCTCTCCGTCTCTGCTGCCAGCTGATCGGACTTGCCTCTTGTTTCTTGGACAACAGATGTATGACACAGATCGATCTGGGTGCATTACTATATAAGGAAGAAGTAGCATCTATGCTCACAGCTTTGCCAGAGGACTGCCTGCCGGCTGACATCGTCGAACCAGGCAAATTAGACGAGATATTTGACCTCATGGATGCCAACAGTGATGGAGAAGTCACATTTGAAGAATTCAAAGCCGCTATGCAGAGAGACAGCTCTCTGCAGGACGTAGTCCTTTCTTCTCTCCGACCATCATAG 1602 0.4295 MGMETRKLSDEYEVSEILGRGGFSVIRKGIKKSGSGKAHVAIKTLRRVGTSETFVFPKTQKGNNNKSIASVGFPTTWRHVSLSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDSNGVHLVLELCSGGELFDRIVAQEKYSEAEAAAVIHQIAKGLEAIHRANIVHRDLKPENCLFLDSRKDSPMKIMDFGLSSVEEFTDPVAGLFGSIDYVSPEALFQGKITNRSDMWSVGVIFYILLSGYPPFIVQNNRQKQQMIMTGSFSFYEKTWKTISSSAKQLISSLLAVDPHRRPSAQEFLTHPWVRGEIAKGDQMDPEIVDRLQKFNARRKLRAAAIASLWSSTVFLRIKNLKSLLGPMILHRRKLKISRYTSRKYGDNATLPEFEEVLKAMNMSSLIPLATRIFDIFDNNQDGTVDLREILCGFSSLKNSKGDDALRLCCQLIGLASCFLDNRCMTQIDLGALLYKEEVASMLTALPEDCLPADIVEPGKLDEIFDLMDANSDGEVTFEEFKAAMQRDSSLQDVVLSSLRPS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0138 533 PANTHER SERINE/THREONINE-PROTEIN KINASE 7 512 - -
Lele09g0138 533 Gene3D - 370 444 - -
Lele09g0138 533 ProSiteProfiles EF-hand calcium-binding domain profile. 396 431 IPR002048 GO:0005509
Lele09g0138 533 ProSitePatterns EF-hand calcium-binding domain. 500 512 IPR018247 -
Lele09g0138 533 Gene3D - 451 518 - -
Lele09g0138 533 FunFam Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 3 128 - -
Lele09g0138 533 Gene3D Phosphorylase Kinase; domain 1 7 56 - -
Lele09g0138 533 ProSitePatterns EF-hand calcium-binding domain. 409 421 IPR018247 -
Lele09g0138 533 Gene3D - 319 346 - -
Lele09g0138 533 CDD STKc_CAMK 12 304 - -
Lele09g0138 533 ProSitePatterns Protein kinases ATP-binding region signature. 18 43 IPR017441 GO:0005524
Lele09g0138 533 Pfam Protein kinase domain 95 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0138 533 Pfam EF-hand domain pair 403 517 IPR002048 GO:0005509
Lele09g0138 533 SUPERFAMILY Protein kinase-like (PK-like) 6 319 IPR011009 -
Lele09g0138 533 SMART serkin_6 12 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0138 533 Gene3D Phosphorylase Kinase; domain 1 76 131 - -
Lele09g0138 533 FunFam Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase 132 322 - -
Lele09g0138 533 ProSiteProfiles Protein kinase domain profile. 12 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0138 533 SUPERFAMILY EF-hand 382 524 IPR011992 -
Lele09g0138 533 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Lele09g0138 533 Gene3D Transferase(Phosphotransferase) domain 1 132 318 - -
Lele09g0138 533 ProSiteProfiles EF-hand calcium-binding domain profile. 487 522 IPR002048 GO:0005509
Lele09g0138 533 SMART efh_1 491 519 IPR002048 GO:0005509
Lele09g0138 533 SMART efh_1 400 428 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0138 Lele-ChrLele09 972335 975304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0138 89 518 EF-hand Containing Proteins AT5G23580 33.333 2.89e-63 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMK1-DCAMKL Lele09g0138 Pkinase 2.7e-56 CL0016