Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0135 ATGAAGAGGTCTTGCGGTGCTTCTTCTTCCTCTTGCTCTTCTTCATCTCCTTCTCCTTCTCCTTCTTGTTCTTCTACGTCTTCTTCTCTCGAGTTTCAGAATCCCGATCAGACGGAAGGGCGAGGCAGAGCGAGTAATAAGCGTGCCAGAAGGAGTAACGGCAATGCAAATGGTAACGGCGATGGTAATAATGATGATAATAAGTCGAAGAAGGTGAAACCCGAAAGCTCGAGCTCTTCCGCCATTAATGGCGGACGAAGAAGTTCCGTTTACAGAGGAGTCACAAGGCATCGATGGACTGGGAGGTTTGAAGCTCATCTCTGGGATAAGAGTTGCTGGAACAATCTCCAGAACAAGAAGGGACGACAAGGGGCTTATGACAATGAAGAAGCTGCTGCTAGAACCTATGATCTTGCTGCTCTTAAATACTGGGGAAGAGATTCAATATTGAATTTCTCGATAGAAATATATACAAAGGAGCTTGAGGAAATGGAGAAGGTCACAAAAGAAGAGTACTTAACTTCATTGCGACGGCAAAGCAGTGGATTCTCTAGAGGGGTTTCTAAGTATCGAGGGGTAGCTAGGCATCACCATAATGGTCGATGGGAAGCTCGGATCGGAAGAGTACTAGGCAACAAATATCTCTACTTGGGAACATATGGTACTCAAGAGGAAGCAGCTACTGCATATGACTTGGCAGCTATACATTACAGAGGCGCGAATGCAGTGACTAATTTCGATACTAGCAGATACATCGACAAGATCAACCTCATCAACCAGAACAACAATGTCGAATCCCAAGAAGATCAAACTGTAATCACAATACCATCTCATGTAGAAGAAGAAGTACAAGATAAAGATGTAGAAGAAGCACCTCCTAATTCATCTTCCGAGTTGGACGCCGAGTCGGAAAATCTGCAGAACCAGAAGCAACCACCACAACAGCAACTACAAAACCGAGAAATCGAACTTGAAAATCCTCAAATTCAAACTAATCAGGTCTCTCCACCAAACGAAGAATCCTCTCCGATTGCTCCTGTGGACCCTACTACTACGACCACCACCGATGAACAGGAGCTTCCATGGATCTTCATGGATGACGACGGGTTCTCTCATTTTCAAGTTCCAGATATGCCTGACGGCGACTTACTGAGCGTGTTCGGTGATGGCGTACGAAGATTCGACGACGACGACATAGGATTTCTCTTCAGGCCAGATCCTGAGGAGGCCGATTTCAACCTGGACGCGATTTTGAGCAGTCCGAGCTGCTACGGAGATCTGGCGACGGCGGATTCAACCAGGATGGTGACGGGTGATGATGATTGTGGTGGGCAAGAGAAGTTGCTCTGTTCTGCAAATTCTGCTTCTTGTTCACCAAACTCCTTGATTTCTTATTCGGATTATACTTCATGA 1413 0.4593 MKRSCGASSSSCSSSSPSPSPSCSSTSSSLEFQNPDQTEGRGRASNKRARRSNGNANGNGDGNNDDNKSKKVKPESSSSSAINGGRRSSVYRGVTRHRWTGRFEAHLWDKSCWNNLQNKKGRQGAYDNEEAAARTYDLAALKYWGRDSILNFSIEIYTKELEEMEKVTKEEYLTSLRRQSSGFSRGVSKYRGVARHHHNGRWEARIGRVLGNKYLYLGTYGTQEEAATAYDLAAIHYRGANAVTNFDTSRYIDKINLINQNNNVESQEDQTVITIPSHVEEEVQDKDVEEAPPNSSSELDAESENLQNQKQPPQQQLQNREIELENPQIQTNQVSPPNEESSPIAPVDPTTTTTTDEQELPWIFMDDDGFSHFQVPDMPDGDLLSVFGDGVRRFDDDDIGFLFRPDPEEADFNLDAILSSPSCYGDLATADSTRMVTGDDDCGGQEKLLCSANSASCSPNSLISYSDYTS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0135 470 Gene3D AP2/ERF domain 188 249 IPR036955 GO:0003700|GO:0006355
Lele09g0135 470 Gene3D AP2/ERF domain 90 155 IPR036955 GO:0003700|GO:0006355
Lele09g0135 470 MobiDBLite consensus disorder prediction 1 40 - -
Lele09g0135 470 SUPERFAMILY DNA-binding domain 89 155 IPR016177 GO:0003677
Lele09g0135 470 PRINTS Ethylene responsive element binding protein signature 229 249 IPR001471 GO:0003700|GO:0006355
Lele09g0135 470 PRINTS Ethylene responsive element binding protein signature 91 102 IPR001471 GO:0003700|GO:0006355
Lele09g0135 470 MobiDBLite consensus disorder prediction 331 358 - -
Lele09g0135 470 MobiDBLite consensus disorder prediction 280 317 - -
Lele09g0135 470 FunFam AP2-like ethylene-responsive transcription factor 89 155 - -
Lele09g0135 470 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 32 318 - -
Lele09g0135 470 MobiDBLite consensus disorder prediction 1 89 - -
Lele09g0135 470 MobiDBLite consensus disorder prediction 49 63 - -
Lele09g0135 470 CDD AP2 89 152 IPR001471 GO:0003700|GO:0006355
Lele09g0135 470 FunFam AP2-like ethylene-responsive transcription factor 188 249 - -
Lele09g0135 470 ProSiteProfiles AP2/ERF domain profile. 189 247 IPR001471 GO:0003700|GO:0006355
Lele09g0135 470 ProSiteProfiles AP2/ERF domain profile. 90 153 IPR001471 GO:0003700|GO:0006355
Lele09g0135 470 Pfam AP2 domain 188 239 IPR001471 GO:0003700|GO:0006355
Lele09g0135 470 Pfam AP2 domain 89 145 IPR001471 GO:0003700|GO:0006355
Lele09g0135 470 MobiDBLite consensus disorder prediction 296 317 - -
Lele09g0135 470 SUPERFAMILY DNA-binding domain 188 248 IPR016177 GO:0003677
Lele09g0135 470 SMART rav1_2 90 159 IPR001471 GO:0003700|GO:0006355
Lele09g0135 470 SMART rav1_2 189 253 IPR001471 GO:0003700|GO:0006355
Lele09g0135 470 CDD AP2 188 249 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0135 Lele-ChrLele09 951013 956799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0135 85 251 AP2-EREBP Transcription Factor Family AT5G57390 68.235 2.29e-79 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele09g0135 AP2 1e-08 CL0081