Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0127 ATGGTAGTGCCAATGATACGAGAGTATGGGAACCAGGCTTCAGAGAAGAAGTTGGCGAACCCTATGAGGGAAATTAAGGTCCAGAAGCTCGTTCTCAATATCTCAGTGGGGGAGAGTGGAGATCGTCTCACCAGAGCTGCTAAGGTGTTGGAGCAGCTTAGTGGCCAAGCCCCAGTATTCTCTAAAGCAAGGTATACTGTTCGTTCCTTTGGTATCAGAAGGAATGAAAAGATTGCATGCTATGTGACTGTTAGAGGTGACAAGGCAATGCAGCTTTTGGAGAGTGGTCTGAAGGTGAAGGAATACGAACTTCTGAGAAGAAACTTCAGTGATACAGGGTGCTTTGGATTTGGCATTCAGGAGCATATTGATTTGGGAATCAAGTATGATCCATCTACTGGTATCTATGGGATGGACTTCTATGTTGTTTTGGAGCGCCCTGGTTACCGTGTGGGACGCCGTCGCAGGTGCAAGGCACGTGTGGGGATCCAGCACCGTGTCACAAAGGACGATGCCATGAAGTGGTTCCAAGTGAAATACGAAGGAGTGATCCTGAACAAGGCCCAAGCAATCTTTGGTTAG 582 0.4777 MVVPMIREYGNQASEKKLANPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQAPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKAQAIFG 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0127 193 ProSitePatterns Ribosomal protein L5 signature. 50 66 IPR020929 GO:0003735|GO:0005840|GO:0006412
Lele09g0127 193 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 12 187 IPR002132 GO:0003735|GO:0005840|GO:0006412
Lele09g0127 193 Pfam ribosomal L5P family C-terminus 77 175 IPR031309 -
Lele09g0127 193 PIRSF RPL5p_RPL5a_RPL11e_RPL5o 5 183 IPR002132 GO:0003735|GO:0005840|GO:0006412
Lele09g0127 193 Gene3D - 12 188 IPR022803 -
Lele09g0127 193 FunFam 60S ribosomal protein L11 13 185 - -
Lele09g0127 193 Pfam Ribosomal protein L5 20 73 IPR031310 -
Lele09g0127 193 SUPERFAMILY RL5-like 20 184 IPR022803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0127 Lele-ChrLele09 894854 897676 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0127 13 193 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 95.028 1.21e-128 357