LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele09g0126	ATGCTTGACTATCATCATTGGCATAACGTTAAAAAGGTCCTTCCTCACAAAAGGCATTCCTTAGGAAGAAAACATGCAAGATATTATAAGAGACAAGACGCTTTGTCCAATTACAGTGATAGTGAAGCTGAACAATTTGAGAATGTGGATGTTGAGCCCTTACTGGTTAGTCAAAGTAGCAAAAAAGTCGGCGCTACTGGCAAGAGTTCTACCAGAAAAAGCAAAACAGGATTGCATATTGAAAATAGGTCCAAAGAAGATAGTTCCAAAGATTTTGAGTCTTCTGATGAATCTGCAGTAGAAACTAGTAAACTTGACAGAGACGTTTCCAGTAAGTTGAAGGAGCATGCTGATGTTGTGGAGGTTTTCAGAGCAGAAAAAGATTTTCTCCTGAAATTCTTAAGAGATCTGGATTTGGGCGCGAAAAGCTTTCGAAACAAGAAAGGAAGATTGACGAAATCGGGGTCATTCCCTATAGCAGCATCTTCAAACATGCGGAATTTTAAATCAAGAAGTACCTTCAAACACAAGCAAACAGAAATTTGGGCCTTTCCAAAGGGGGAAAAGTTGCTTGCTGGAACTCAAGCACTAAAACTGTTTGCAAAAGATGGTGCTTATATGAAAGAAGTGCCATTAATGGGTGATTATGGTATGGACAGTGCTATGAAGCACACTGGGTTTGCTTTATCAAGTCCTTCAAATGGATTAAATAACAAACCCAAAGGGTGGAATCAACTGGTTCTTCATCGTTTCAAAGTTATCAAGCAGAGGATAAAGCATGCCCTTATGGAATTCACAAAAAATGGTTATCATACTTCTCTCGAAGCATTCCGCCGGAGAGTTTCGTATGAAAACAGGCTTGGGAAAGAGGTGTCACAAAGTTTAGAGGATGGCATGACCGAGAATATAAGCTCAAATGAGATTAAGGCCTCTGATAATGACTCCAACAGACATGAAATTCCTCCCATAAAAAGAACATCTTCTCTAAATGAATCAATGGATAGATATACTCAATTATTTGAGCGGAGTTTTGGCAAAGATGTCAAGTTGCCTAGCTCAATGTCCAAGAGCTTAAGAGTGACAAATGCAGATAACAATCACACGAGTGGTAATGCTCCAAAGTTGTCCAAAAGGAATTTGTCTCTCCCGAATATCGAGTCCATAGGCTTCATTCTTCACGAGGCCATTTGTGATGCAAATGATGCAGGGAGTATTCCAGCAAGAACTTCTTTGGACAATAACAAGAAAGAAGAAACTGATATTCTTGTTCAACGAAAATCAGTGAGCCTTCTTGCGAGCAAAGACAAACCACTCAATGATATAATCGAGACTAAAGTTAAGGAAGAGGATGAAAGTAGTGCGAGGGATGTGACTCCTCCCAAACCTTTATCCCACTCAACTGCAGAAAATGCAGAAATGGAGGTGACTATGGATCATGGCAAGGATGTGATGGATATTCTTGAAGCTAGCAGTGAAGACAATGCAACCGACAATACAAGAGGCACAGAGAGAAATACAAGAGGTTCTAGCATGAGTGATATGGAGGAAGATTTACTGAAAATAGAAAGCAGACACTCTTTGCAAGCAAAAGGCACAAACAGGAGCAGTGACAATTATTTCCTGCACTTGGAATCAGATATAATGAATGATTCAAATTTCAAATATGTGAAGCATATTATTGAACTTTCAGGCTTCATGGAGAATGATCATACTCAAATGTGGCATACAGTGAACCAACTACTGAAGCCCTCTTTATGCAGCAAAGAAACTGAATGCTCTGGAGAAGAAGAGACTGACAAAATTGATCATCAGCTTCTTTTTGATATAGTGAATGAGAGTCTGCTTGAAATACATGAAGGATCATCGACATACTTCCCGAGGCCCTTCTCCTTCAATGTCCGGCTTCATCCTATACCGAAGGGTCATCTACTTCTTAAGGAAGTGTGGGCTCGAGTTAACTCGTATCTGAGCTTAACTCCGGAGTTGGATCAAACATTAGATGATGTTGTGAGACGAGATTTGGAAAGTAATGGGTGGATGAACCTTCAAAGTGAAGAAGAGTGGGTAGCACTTGAACTAGAGGACATGATTAAGAAGAATGTAAGCGAGAATCCCCCTTTTCAGAGCCTTGACATTCTTGAGCAGCCACATGAACGCTCTCTTCTTGTAGAAACACTTAGAATGATGCAAATTCGAGGTCGAGGGCGTTTCGTCGGTTTATCAAACATGGACAAGAGCATGCTAGGAGATCTGGACAACCTTCCCGAGGAAGATAAGCTCAAAATGGCCGGCATGATCGATCAGCTCCAAATCCGAGACAGCACCTCTGATCAAAGGAAGATTAGATATTTGAACTTACTTTACCCGCATTTCTGTCTCGCGGCCAATGCTGGCCATGGATTTGGTTCAAGTTTAAACCCCTATATGCTTCTGTTTGTCGCACCTTTTTGTCTAAGAATGTACAATTCACTGGTGGAGAGATGCTTTAATGATTGTGTTGACTCCTTCAAGCATAAGTCCCTGCAAAAGCAAGAGGAGAGCTGTGTTCGAAGATGTGCAGAGAAGTTCTTGAAACACTCCATGCGTGTTGGCATGAGGTTTGCAGAGCTCAATCAAGGAGCAGCCACACAAGATTGA	2637	0.4099	MLDYHHWHNVKKVLPHKRHSLGRKHARYYKRQDALSNYSDSEAEQFENVDVEPLLVSQSSKKVGATGKSSTRKSKTGLHIENRSKEDSSKDFESSDESAVETSKLDRDVSSKLKEHADVVEVFRAEKDFLLKFLRDLDLGAKSFRNKKGRLTKSGSFPIAASSNMRNFKSRSTFKHKQTEIWAFPKGEKLLAGTQALKLFAKDGAYMKEVPLMGDYGMDSAMKHTGFALSSPSNGLNNKPKGWNQLVLHRFKVIKQRIKHALMEFTKNGYHTSLEAFRRRVSYENRLGKEVSQSLEDGMTENISSNEIKASDNDSNRHEIPPIKRTSSLNESMDRYTQLFERSFGKDVKLPSSMSKSLRVTNADNNHTSGNAPKLSKRNLSLPNIESIGFILHEAICDANDAGSIPARTSLDNNKKEETDILVQRKSVSLLASKDKPLNDIIETKVKEEDESSARDVTPPKPLSHSTAENAEMEVTMDHGKDVMDILEASSEDNATDNTRGTERNTRGSSMSDMEEDLLKIESRHSLQAKGTNRSSDNYFLHLESDIMNDSNFKYVKHIIELSGFMENDHTQMWHTVNQLLKPSLCSKETECSGEEETDKIDHQLLFDIVNESLLEIHEGSSTYFPRPFSFNVRLHPIPKGHLLLKEVWARVNSYLSLTPELDQTLDDVVRRDLESNGWMNLQSEEEWVALELEDMIKKNVSENPPFQSLDILEQPHERSLLVETLRMMQIRGRGRFVGLSNMDKSMLGDLDNLPEEDKLKMAGMIDQLQIRDSTSDQRKIRYLNLLYPHFCLAANAGHGFGSSLNPYMLLFVAPFCLRMYNSLVERCFNDCVDSFKHKSLQKQEESCVRRCAEKFLKHSMRVGMRFAELNQGAATQD	878

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele09g0126	878	MobiDBLite	consensus disorder prediction	355	377	-	-
	Lele09g0126	878	MobiDBLite	consensus disorder prediction	489	514	-	-
	Lele09g0126	878	SUPERFAMILY	Tim10-like	818	874	IPR035427	-
	Lele09g0126	878	MobiDBLite	consensus disorder prediction	59	107	-	-
	Lele09g0126	878	PANTHER	PROTEIN TRM32	1	697	IPR044257	-
	Lele09g0126	878	Pfam	Tim10/DDP family zinc finger	819	869	IPR004217	-
	Lele09g0126	878	MobiDBLite	consensus disorder prediction	491	508	-	-
	Lele09g0126	878	Pfam	Domain of unknown function (DUF4378)	553	700	IPR025486	-
	Lele09g0126	878	MobiDBLite	consensus disorder prediction	444	471	-	-
	Lele09g0126	878	MobiDBLite	consensus disorder prediction	301	328	-	-
	Lele09g0126	878	Gene3D	Mitochondrial import inner membrane translocase subunit tim13 like domains	816	878	IPR035427	-
	Lele09g0126	878	MobiDBLite	consensus disorder prediction	59	73	-	-
	Lele09g0126	878	MobiDBLite	consensus disorder prediction	74	107	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele09g0126	Lele-ChrLele09	880958	886122	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele09g0126	118	697	TRM (TON1 Recruiting Motif) Superfamily	AT5G02390	28.666	4.63e-48	182