Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0117 ATGAAACTGAGAGAGTCAGAAATATTTGCAGAAGAGGAAGATGTTGGTGGAGGAACATACATAAAGAAGGGACCGTGGAGTGCTGAAGAAGATGAGATTCTGATGAAACATGTCAAGAAAAACGGTCCAAGGGATTGGAGCTCCATTCGATCCAAAGGCTTGCTTCCCCGCACCGGCAAATCATGCCGGCTCCGATGGGTTAACAAGCTTAGACCCAACTTGAAGACAGGGTGCAAGTTTTCAGCAGAGGAAGAAAGAGTGGTGATAGAATTGCAGGCAGAGTTTGGGAACAAGTGGGCCAAAATAGCAACATACTTAGAAGGAAGAACAGACAACGATGTGAAGAATTTCTGGAGCAGTAGGAGAAAGAGGTTGGAGAGAATGTTGCAGAAACCATCCCCGCCTTCATCATCATCATCATCAAAGCCACACAATAAGAACAAAGCAACAATATCTCATATAATTCATCACCCACCACCACCAGTAGTTGAAGAGAAGCAAGATTGTGAATTTCAGGTTCCTGCCTCATGCGGTTCAAATCATGTGGAGCAAAACCCATCAGGCAATAATAACAAGTTTCAGATGGTTGATGAAACTGGGGAGATGAAGTTTCAGAATGTGAAAGCAGAGGAGGTCACTCCTCTTCACATGGTTCCATCATTTGAGTCGTCTTCATCAGAGTACACCTTTTCTCAAGTTCTTCTTCCTGTTGAGTCCCACCAAGTGGACTACGGCGGACTCTTGCCGCCACCGGTCTGCCATGGTCTGGTCGATCTGGAACCTTTCGATGCCACCTTTCTCGAGGTTTTCGAGCAGCACAAGAAGCCAGGTCTCGCATTGGGAGGGATTGCTCAGAGTTCAATTCCAGCAAATGGCTTCTTTGAGGACTTCCCAAGTGACATATTTGATTACTTTGAAGAACTTCCTAACTCATTAGACATATGA 945 0.4529 MKLRESEIFAEEEDVGGGTYIKKGPWSAEEDEILMKHVKKNGPRDWSSIRSKGLLPRTGKSCRLRWVNKLRPNLKTGCKFSAEEERVVIELQAEFGNKWAKIATYLEGRTDNDVKNFWSSRRKRLERMLQKPSPPSSSSSSKPHNKNKATISHIIHHPPPPVVEEKQDCEFQVPASCGSNHVEQNPSGNNNKFQMVDETGEMKFQNVKAEEVTPLHMVPSFESSSSEYTFSQVLLPVESHQVDYGGLLPPPVCHGLVDLEPFDATFLEVFEQHKKPGLALGGIAQSSIPANGFFEDFPSDIFDYFEELPNSLDI 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0117 314 Gene3D - 78 153 - -
Lele09g0117 314 ProSiteProfiles Myb-like domain profile. 18 70 IPR001005 -
Lele09g0117 314 ProSiteProfiles Myb-like domain profile. 79 122 IPR001005 -
Lele09g0117 314 SUPERFAMILY Homeodomain-like 21 118 IPR009057 -
Lele09g0117 314 MobiDBLite consensus disorder prediction 131 147 - -
Lele09g0117 314 Gene3D - 22 75 - -
Lele09g0117 314 MobiDBLite consensus disorder prediction 125 147 - -
Lele09g0117 314 Pfam Myb-like DNA-binding domain 26 76 - -
Lele09g0117 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 126 IPR017930 -
Lele09g0117 314 CDD SANT 25 70 IPR001005 -
Lele09g0117 314 FunFam Transcription factor GAMYB 78 151 - -
Lele09g0117 314 PANTHER TRANSCRIPTION FACTOR DUO1 17 311 - -
Lele09g0117 314 SMART sant 76 124 IPR001005 -
Lele09g0117 314 SMART sant 22 72 IPR001005 -
Lele09g0117 314 Pfam Myb-like DNA-binding domain 79 119 IPR001005 -
Lele09g0117 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 74 IPR017930 -
Lele09g0117 314 CDD SANT 79 118 IPR001005 -
Lele09g0117 314 FunFam MYB transcription factor 23 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0117 Lele-ChrLele09 815224 816504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0117 21 129 MYB Transcription Factor Family AT3G60460 85.321 2.98e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele09g0117 Myb_DNA-bind_6 6.5e-12 CL0123