LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele09g0115	ATGGACGCCACACACACCATGTTTTGTCGTCAAAACGATTTGGTCAACCCTCTGAGCTCAATGGGCATGCAAGTCTCCTGCATTCTCGTCATCTCACACTTCTTCAACGTCGTGCTTAAAACTTTCGGTCAGCCTGGACCCATTGCGCAAATTTTGGCTGGAGTGGTATTAGGGCCAACGGCATTATCTCATGTTAAGCAAATACAAGAATATTTTTTTCTTCAGAGTTCCACAAATTACTATGAAGTTGTGAGCTTCTTCTGCAGAATCTTCATCACATTCTTGTTTGGATTAGAGATGAATACTCAACACATGTTGCTCAACCTACGTTTAGTTAGTTTGGTAGCCTGTGGTGGTGCAGCAGTAGGCAGCGTTTTCGGTTTAGGTGTGTCCTTTTATCTGTATAGGCAGTTAACAAACAATGCCCCTTTGCCATACTTTTGTATGATCATTATGCTTATAGTATCATACACAAGTTCTCCCATAGTGATTCGTTTGGCATCAGAAATGAGGTTGATTGCATCGAACATGGGGCGAATCGCGGTGTCTTCTGCGCTAATCACAGAAATGACTTGCTTGTTATTTTTCAATCTGTTAGTTAACTGGCATACAAAAAGTATTCTGGGTGGGTTTGGTTGCCTTGTAATTACTGGGGTGTTGATTCTGATAAACAAGCATTTAGCCTTATGGTTAAATAAAAGACATGCAAACCAAAAGTACCTAAAGGCTCCTCAACTATTACTCATCCTATTCCTTCTTGTAGGGAACTCAATGATTATAGAAATTTGGGGTTTCAACAGTATAATCAGTTGTTTTTTAGTTGGCTTGATGTTTCCAAGGGAAGGTAAAACTGCTAGAACATTGATACATAAACTCGGTTATTCTATTTACAACTTTATACTTCCAGTGTATTTTGGCTACTTAGGCTTTCAATGTAACCTCATTGCCTTGAGAAACCTGAATGATGTTACCAATGTCGCCATATTAATCTTACTGAGCATTGGCAGTAAGCTTAGTGGCACTCTTCTGGCTTCTTGTTACCTTCGAATTCCACCAAGTGAAGGTATTTTTCTTGGCTTCATATTGAATAGCAGAGGCTATGCTGATCTTCTATTTTTTGGCGCGGCTGCCAAAGGAATAATTGTAAGTTTATGTCTTAACTTCATTCAGTCAATGCATTCGCAGTTCAATTCTCAACTTCCTGTACTGATTGATTCATTGGCTCTTTTTTTTTTTTTTAATCTGCAGAGTTTTTCTGCAGAAGCTTACAATGTGTTGTTAGTATCAGTAGTGCTTAACACAATTATATCAGGAATAATTGTTGCTTCTCTGGCCAGAGCGGATGATAAAATGTTTGCAAACCAACATACAACTCTTGAATCACAACAAGTGGAGGATGAGCTTCGAATTCTCGCTTGCGTGTATGATCCGCGTCAAGTATCCGCTGTATTAGCATTGGTTTTAGCAATAAATGGCGCTAGAACATCACCGGCTACCGTTTACTCAATGCACCTAATAGAACTTGTGAAGAAGATCAAGTCAAATATGTTATACCACCAAAAAGAAAATGCTGAGCTTAGTGATGATGATGACTATGGTGGCAATGATGTAGTGGAAATTAATGAAACTATTGACAACTTCACTACTCAAACAAAGATTTTGATCCACCAAAGGAAGGCAGTATCTTCTTTCCCAAGCCTGTACGAAGATGTCTGCAATGATGCAGAGGATTTACATGTGACTATCATTTTGCTTCCTTTTCACAAACACCAACGTATCGATGGAAAATTGGAAAGCGGGAAGGAAGGCATAAGGACAACGAATCAGAAGGTTCTCCGACATGCCCCTTGTTCGGTTGGTGTCATTGTAGAAAGAGGACTGAGTAGGGTTCCTGGTTTTTCACAACTAACTGCCTCTGAAGGCATACAAAATGTTGCAACACTTTTCTTTGGAGGTTCAGACGATCGCGAGGCCGTTGCTTGGAGCATACGAATGGCGCAACACTCCAAAATCAACTTAACCATCATCCGATTCCTACTCGCTTCCATGCCACAAAGCGAGACATCCACTGAAGAATCAGAAGACCGAGAAATTCTCATGTCATTGTCAGGGCAAGAAACTGCGAACGAGGTTGATAATACCTTTATGGTTGATTTCTACAACCGATTCGTGGCATCGGGTCAGGTCAGATACGTGGAGAAGTTTGTGAGCAATGGAGCACAAACAGTTCAAGTTTTCAGAGAAATAGGGGATATGTATTCTTTATTCATAGTAGGAAAGGGTGGAAGAGGACATTGTTCATTGACAATTGGTATGAGTGATTGGGAGGAGTGTCCAGAACTTGGAACAGTTGGTGATGTCTTGGCTTCTTCAGAACTGGCCATTCATGGCTCTGTTTTGGTTGTACAGCAGCATAGGGATATGAAGAAAAACCTGATGAATGATTGA	2448	0.4048	MDATHTMFCRQNDLVNPLSSMGMQVSCILVISHFFNVVLKTFGQPGPIAQILAGVVLGPTALSHVKQIQEYFFLQSSTNYYEVVSFFCRIFITFLFGLEMNTQHMLLNLRLVSLVACGGAAVGSVFGLGVSFYLYRQLTNNAPLPYFCMIIMLIVSYTSSPIVIRLASEMRLIASNMGRIAVSSALITEMTCLLFFNLLVNWHTKSILGGFGCLVITGVLILINKHLALWLNKRHANQKYLKAPQLLLILFLLVGNSMIIEIWGFNSIISCFLVGLMFPREGKTARTLIHKLGYSIYNFILPVYFGYLGFQCNLIALRNLNDVTNVAILILLSIGSKLSGTLLASCYLRIPPSEGIFLGFILNSRGYADLLFFGAAAKGIIVSLCLNFIQSMHSQFNSQLPVLIDSLALFFFFNLQSFSAEAYNVLLVSVVLNTIISGIIVASLARADDKMFANQHTTLESQQVEDELRILACVYDPRQVSAVLALVLAINGARTSPATVYSMHLIELVKKIKSNMLYHQKENAELSDDDDYGGNDVVEINETIDNFTTQTKILIHQRKAVSSFPSLYEDVCNDAEDLHVTIILLPFHKHQRIDGKLESGKEGIRTTNQKVLRHAPCSVGVIVERGLSRVPGFSQLTASEGIQNVATLFFGGSDDREAVAWSIRMAQHSKINLTIIRFLLASMPQSETSTEESEDREILMSLSGQETANEVDNTFMVDFYNRFVASGQVRYVEKFVSNGAQTVQVFREIGDMYSLFIVGKGGRGHCSLTIGMSDWEECPELGTVGDVLASSELAIHGSVLVVQQHRDMKKNLMND	815

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele09g0115	815	Pfam	Sodium/hydrogen exchanger family	28	445	IPR006153	GO:0006812\|GO:0015299\|GO:0016020\|GO:0055085
	Lele09g0115	815	PANTHER	CATION/H + ANTIPORTER	12	806	-	-
	Lele09g0115	815	Gene3D	-	20	391	IPR038770	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele09g0115	Lele-ChrLele09	806504	809205	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele09g0115	7	807	Antiporter Super Family	AT1G16380	39.387	0.0	568