Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0099 ATGGCGCTTAAAACTCTCTCTATTGTCCTCCCTTCTCTTTCTATCTCTATCCCACACCACTTCTCACCCTTCAACCTTAAATTGTCCAAATTGGATTTAAAGCCTTCGCTTATAATCTGCGAATTTTCCAAGTCACAGACGCCAGCTTCCCTGAAACCACCATCCTCAGATGCGCATTTCACAGACTATGGACAGGTAGAACCTGAAGGAACCGGCGCAGAAGCTCCCACACCCGGTGAGAGGCATCTTGAACATCAGAAGTCCATTGAGGCTCTGAAGCTCGTCCTCAAAGAGAACAAGAAGGAGCGGAAAAAAAGAAGAAAACATCACCAGCTTAAAACCATTCTATGTGGGCGATGCCGACTTTTGTCTCATGGGCAGATGATAACTGCTGTTGGTGGACATGGAGGGTACTCCGGTGATAAACAATTTGTTACAGCTGAAGAGCTTCGAGAAAAATTGTCTCACTTACGCCATGAGAAAGCTTTAATTGTGAAATTGATTGATCTCCTTCCAAGAGATACCGTTCTTAATTGTATTGGGGATTGGGTTGTAGAAGCTGCCACCAAAAAAGGGCTAAAGGACGAGATGTGTACATTCTGGGGGTCAGCTAATGTTGGGAAATCTGCATTCATTAACGCTTTACTGAAAATAATGGCAGAAAAAGATCCAGTTGCTGCAGCTGCACAGAAGTACAAACCGATACAATCTGCTGTCCCTGGAACTACCTTAGGCCCAATTAAAATTAAGGCCTTTCTAGGAGAGGGGAATCTATATGACACTCCAGGAGTTCATCTCCACCATAGGCAAACTGCAGTTGTTCATTCTGAGGATCTTTCCTGTCTTGCTCCTCGAAGCCGACTGAGGGGTCTATCTTTCCCTGTATTCAAAGACAATGTTGTCGCAGATCATTCCAAATCAAATGGCTTAAATGGATTTTCAATATTTTGGGGAGGGCTTGTCAGAATTGATGTCTTGAAGGCTCTACCAGAAACATGCTTGACATTTTACGGGCCCAAGGCCCTACAGATTCATATTGTACCCACTGAGAATGCAGATGATTTTTACCAGGGTCTTGCTTTACCTTCTCAGAAAGAAGTTGGAGTTCTGCTGACCCCACCAACTGAAAGAATAAAGGCTGAGAACTGGGGAGGACTTGAATCAGAACGTAATTTGCAAATAAAATTTGAAGATGCGGAAAGGTATCAATCACTCTATCGCTCTATCACTTACTCCCCTAGTTCTGTTGCATCTACTTTTGACATATCAGAAACTCGTGGGGAATTGCATTTAGCAGTCCATGTTCCAAAGCCTGTTGAGATTTTTGTGAGACCACCATTACCAGTTGGCAAGTTTGGAGCAGAGTGGGATCAATATAGGGAATTAACAGAGAAGGAAGAGGAAACCGGACCAAAATGAACCGCACTTCGAGCCTACCTTGCTGAGTTCATCTCCACTTTCCTCTATGTCTTCGCTGTCATCGGCTCCGCCATGGTAGTTGGAGGCCATATCAACCTATCAACTGCTTTCCTCTATTGGATTTCTCAGATGATTGCTTCTGTCTTCGCCTGCCTTCTTCTTAAGATCACCTTCGTTGGAATGCACGTGCCAAGTTACACAATAGCACCACAAATGACAGGGTTTGGGGCATCAATAGTGGAAGGTGTCCTTACATTTGCATTAGTGTACACCGTGTATGCTGCTAGGGACCCCAGGCGTAGTGGCCAACTGGGGTCCACGGGTGCCCTAGCCATCGGCCTGACCGCCGGAGCCAACGTCCTAGCCGCTGGTCCCTTCTCAGGCGGGTCGATGAACCCGGCTTGCGCCTTCGGCTCAGCCACCATCGCGGGAACGTTCAAGAACCAAGCAGTGCATTGGGTTGGACCCCTAATTGGTGCTGCGGTTGCTGCTCTTGTTTATGACACTGCAGGGTATCCTTCTCAGAATGCTGAGTCATTTGTAGAAGCAGATAGGGTTTGA 1980 0.4631 MALKTLSIVLPSLSISIPHHFSPFNLKLSKLDLKPSLIICEFSKSQTPASLKPPSSDAHFTDYGQVEPEGTGAEAPTPGERHLEHQKSIEALKLVLKENKKERKKRRKHHQLKTILCGRCRLLSHGQMITAVGGHGGYSGDKQFVTAEELREKLSHLRHEKALIVKLIDLLPRDTVLNCIGDWVVEAATKKGLKDEMCTFWGSANVGKSAFINALLKIMAEKDPVAAAAQKYKPIQSAVPGTTLGPIKIKAFLGEGNLYDTPGVHLHHRQTAVVHSEDLSCLAPRSRLRGLSFPVFKDNVVADHSKSNGLNGFSIFWGGLVRIDVLKALPETCLTFYGPKALQIHIVPTENADDFYQGLALPSQKEVGVLLTPPTERIKAENWGGLESERNLQIKFEDAERYQSLYRSITYSPSSVASTFDISETRGELHLAVHVPKPVEIFVRPPLPVGKFGAEWDQYRELTEKEEETGPKXTALRAYLAEFISTFLYVFAVIGSAMVVGGHINLSTAFLYWISQMIASVFACLLLKITFVGMHVPSYTIAPQMTGFGASIVEGVLTFALVYTVYAARDPRRSGQLGSTGALAIGLTAGANVLAAGPFSGGSMNPACAFGSATIAGTFKNQAVHWVGPLIGAAVAALVYDTAGYPSQNAESFVEADRV 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0099 659 Pfam Major intrinsic protein 497 640 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele09g0099 659 Pfam 50S ribosome-binding GTPase 199 268 IPR006073 GO:0005525
Lele09g0099 659 PRINTS Major intrinsic protein family signature 623 643 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele09g0099 659 PRINTS Major intrinsic protein family signature 586 608 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele09g0099 659 PRINTS Major intrinsic protein family signature 553 571 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele09g0099 659 PRINTS Major intrinsic protein family signature 485 509 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele09g0099 659 SUPERFAMILY Aquaporin-like 474 647 IPR023271 -
Lele09g0099 659 Gene3D Glycerol uptake facilitator protein. 496 656 IPR023271 -
Lele09g0099 659 MobiDBLite consensus disorder prediction 50 79 - -
Lele09g0099 659 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 268 IPR027417 -
Lele09g0099 659 Gene3D - 141 268 IPR027417 -
Lele09g0099 659 PANTHER NO-ASSOCIATED PROTEIN 1, CHLOROPLASTIC/MITOCHONDRIAL 202 473 IPR044229 GO:0003924
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0099 Lele-ChrLele09 694485 702059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0099 475 658 Major Intrinsic Protein MIP AT3G47440 50.855 5.27e-63 207