Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0079 ATGGGAGTGCATTCCAGTCTGTTGCCTTATTCTCCTACTGGGGCAGCTTTTTCACCTGGCCTGCTTCTGACAATCCCTAGGAAGAAGACAGGAATTCTTGATGATGTTCGTTCTAGTGGTTGGCTGGATGCCATGAAATCATCTTCTCCTACAGCCAAGAAGATAACAAAGGTTTTTAATCATGGTTTCACATCATCTGATGCTGATAGTGCTTACAGTACCTGGCTGATGCGTGCTGCTGTGAAAAAAGTGGCAGAGCTTTTTCCAACTGCAATAGTTAGTGGAAGAAGCCGTGACAAGGTATATGAATTTGTAGGACTAAATGAACTCTATTATGCTGGTAGCCATGGGATGGACATCACTGGACCTGTCAGACAATCTGTATCTGATAACCATACTAACTGCATTAGGTCTACTAACAATCAGGTGTTTGAATCCCTTATTGAAAATACAAAAGAAATTAAAGGAGCAAAAGTTGAGAACAATAAATTCTGTCTCTCTGTACACTATCGCAACGTAGAGGAGAAGAATTGGGAAATAGTGTGGAAAAGAGTCCTTGATATTCTGAAGGACTATCGAGGTTTGCGAATAACCCATGGGCGCAAGGTTTTAGAGGTCCGACCAAAGATCGATTGGGATAAGGGGAAAGCCGTCACATTTTTACTCGAGTCACTTGGGCTTAGCAACTGTGATGATGTGCTCCCTATATATGTTGGAGATGATCGTACTGATGAAGATGCTTTTAAGGTTTTGAGGGAGGGAAATAAAGGGCATGGCATCCTAGTTGCTTCTGCACCCAAGGAAAGCAATGCCGTCTTCTCTCTTCGGGATCCATCAGAGGTGATGGAATTTCTCAAGTCTCTTGTTGTTTGGAAGTCAGGCCCCCTTAAAAAGTGA 897 0.4292 MGVHSSLLPYSPTGAAFSPGLLLTIPRKKTGILDDVRSSGWLDAMKSSSPTAKKITKVFNHGFTSSDADSAYSTWLMRAAVKKVAELFPTAIVSGRSRDKVYEFVGLNELYYAGSHGMDITGPVRQSVSDNHTNCIRSTNNQVFESLIENTKEIKGAKVENNKFCLSVHYRNVEEKNWEIVWKRVLDILKDYRGLRITHGRKVLEVRPKIDWDKGKAVTFLLESLGLSNCDDVLPIYVGDDRTDEDAFKVLREGNKGHGILVASAPKESNAVFSLRDPSEVMEFLKSLVVWKSGPLKK 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0079 298 Gene3D - 71 274 IPR023214 -
Lele09g0079 298 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 66 293 IPR044651 GO:0004805|GO:0005992
Lele09g0079 298 FunFam Trehalose 6-phosphate phosphatase 139 298 - -
Lele09g0079 298 SUPERFAMILY HAD-like 68 290 IPR036412 -
Lele09g0079 298 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 78 252 IPR006379 -
Lele09g0079 298 TIGRFAM T6PP: trehalose-phosphatase 70 289 IPR003337 GO:0003824|GO:0005992
Lele09g0079 298 FunFam Trehalose 6-phosphate phosphatase 134 209 - -
Lele09g0079 298 Gene3D - 133 209 - -
Lele09g0079 298 Pfam Trehalose-phosphatase 66 279 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0079 Lele-ChrLele09 530806 533310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0079 92 288 Trehalose Biosynthesis Gene Families AT1G68020 23.810 2.97e-06 46.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0079 09 530806 533310 Lele11g0069 11 1524278 1526852 hybridization
Lele09g0079 09 530806 533310 Lele12g1172 12 18802566 18804860 hybridization