Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0073 ATGAATTCTTTTTCGTTTGTTCCACCTGGATTTAGGTTCCATCCCACAGATGAAGAACTTGTTGATTACTACCTGAGGAAGAAAGTGACTTCAAGAAGGATTGACCTTAATGTTATCAAAGATGTGGACCTCTACAAAATTGAACCATGGGATCTTCAAGAGATTTGCAGGATAGGAACAGAAGAGCAAAATGAGTGCACATATACTAAGTTCCTTTTCCTGGTTGATAATTTGGATGTTGCTGATATTTCAAATGAAGAAGGATGGGTTGTGTGTAGAGTATTCAAGAAGAGAATAACAACCATACAGAAAGTGAGTGAGCATGACTCTCCCTGTTGGTATGATGAACAAGTCTCAACTTTCATGCAAGACTTGGACTCTCCAAAGCAACAAAATCCTCAACAACCTAATTTGATGTATCACCAAATCCCTATCATCAATAATAATTATCCTTGCAAGAAAGAGATGGAACATCCTCACAACATTCCATTGCTTCACCACCTTCAAACTCGCCACCACTTCCTCCCTCAGCTCCCGCTTCTCGATTACCAGAACCCGAAATTGCTCCAATCTCCGGCCATAAACCCTAGCAACACCAACAACTTAATGGCACCATATGGTCTTGATGTGATGAACCATGATCAGCAAACTTTTCAGGCTGCTGTTTATGGCGGTAGTAGTAGCCAAGAACAGGTGGCAGCGGACGATGAACAAGTGACTGATTGGCGAGTACTGGACAAGTTTGTCGCTTCACAACTTAGTCAAGAAGATGTGCCTAGTGATAATAACAAGGACGACAACAATAATAATGCAGGCACAAGCAGCAGCAGCAACAATATTTTTCAGAGCGCCATGGAAAATATTGCTAACAGTGTACAATTCAGAGCATCATCAAATTTGGAAACGCAGCATGGTTCCAGAAAATGCCTCAACTTCAACCTCAAGTTGCCCAATTGA 957 0.4138 MNSFSFVPPGFRFHPTDEELVDYYLRKKVTSRRIDLNVIKDVDLYKIEPWDLQEICRIGTEEQNECTYTKFLFLVDNLDVADISNEEGWVVCRVFKKRITTIQKVSEHDSPCWYDEQVSTFMQDLDSPKQQNPQQPNLMYHQIPIINNNYPCKKEMEHPHNIPLLHHLQTRHHFLPQLPLLDYQNPKLLQSPAINPSNTNNLMAPYGLDVMNHDQQTFQAAVYGGSSSQEQVAADDEQVTDWRVLDKFVASQLSQEDVPSDNNKDDNNNNAGTSSSSNNIFQSAMENIANSVQFRASSNLETQHGSRKCLNFNLKLPN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0073 318 Gene3D NAC domain 16 74 IPR036093 GO:0003677|GO:0006355
Lele09g0073 318 Pfam No apical meristem (NAM) protein 8 61 IPR003441 GO:0003677|GO:0006355
Lele09g0073 318 ProSiteProfiles NAC domain profile. 7 171 IPR003441 GO:0003677|GO:0006355
Lele09g0073 318 SUPERFAMILY NAC domain 5 97 IPR036093 GO:0003677|GO:0006355
Lele09g0073 318 MobiDBLite consensus disorder prediction 253 278 - -
Lele09g0073 318 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0073 Lele-ChrLele09 489402 491267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0073 1 68 NAC Transcription Factor Family AT1G12260 76.471 6.80e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele09g0073 NAM 1.3e-14 No_clan