Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0037 ATGTTGGACCTCGGCTATGGAAAGAGAAGGCACAAAATCCATGACTGGTTGGTAATGTCTCAAGAGAGTTCAGTTTCAGACCCTTCTTCGGCTTGCTGCTCAAGATCGGATCATTTGGATTCAGCTTCAGCTGAGCTCAAGCTTTACCGAGCCTTCATTTTCTCTGTACCAATCTTCTTCACTTTCATCCTGCTCTTTCTGTTCTACGTGTTCTACCTTCGACCTCGTCGGGTTGATTGGTCGTCTCTTAGGATGAGAGCGTTTGCGGCTGCGGAGGATAATGCCGGTAACTCCAGGCCTGAATTGGGTTTGAAGAAAGAACTGAGAGAGATGCTGCCGATTATAGTATACAAAGAAAGCTTCTCAGTTAAAGATACGCAGTTAGAAAGGTTTTCACCTATTTCTGACCTGTACCAATGCTCAGTTTGCCTTTTGGACTACCAACCAGAAGACAAGCTTCAACAGATACCTGCATGCGGCCATACATTTCACATGAGCTGCATTGATCTTTGGCTCACCAACCACAGCACCTGCCCTCTCTGCCGCTTGTCCCTTCTAGCTTCTGCTAAATGTTCAACTGAGACATCTAATTTACAGTTAGAAAGACCATCTGGCAATGATGAAACACCAACTGCACAATTATCTGAATCAAGATCTACAACGCATCCAGATAATAGTGTTGCTCAGAGTTTCTCTAGAGATAATGCAAGCAGCGCCCACTGCATTGATGTTGAAAGAGGAAATGCAGAAAGCGGTTAG 759 0.4493 MLDLGYGKRRHKIHDWLVMSQESSVSDPSSACCSRSDHLDSASAELKLYRAFIFSVPIFFTFILLFLFYVFYLRPRRVDWSSLRMRAFAAAEDNAGNSRPELGLKKELREMLPIIVYKESFSVKDTQLERFSPISDLYQCSVCLLDYQPEDKLQQIPACGHTFHMSCIDLWLTNHSTCPLCRLSLLASAKCSTETSNLQLERPSGNDETPTAQLSESRSTTHPDNSVAQSFSRDNASSAHCIDVERGNAESG 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0037 252 SMART ring_2 140 181 IPR001841 -
Lele09g0037 252 MobiDBLite consensus disorder prediction 197 237 - -
Lele09g0037 252 CDD RING-H2_EL5_like 139 182 - -
Lele09g0037 252 MobiDBLite consensus disorder prediction 197 252 - -
Lele09g0037 252 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 91 187 IPR013083 -
Lele09g0037 252 PANTHER OS11G0150450 PROTEIN 60 223 - -
Lele09g0037 252 ProSiteProfiles Zinc finger RING-type profile. 140 182 IPR001841 -
Lele09g0037 252 Pfam Ring finger domain 139 182 IPR001841 -
Lele09g0037 252 SUPERFAMILY RING/U-box 139 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0037 Lele-ChrLele09 257903 261708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0037 41 251 C3H Transcription Factor Family AT4G10150 49.065 2.97e-62 193