Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0036 ATGGTAGAATTTCTGACAAATCAAGAATTTGACCCCGAGGGAATTCCTCATTTTAATGTTCCTTCTCAGATTCTCTGTAGAGTTCTAAACATTCAGCTTTTGACTAATCCAAGAGTTCCGGATCCAACCCCACCACCTGAAACCCATAAACAAGAACTTCACTCATTTTGCCAAACCTTAACAGTTTCTGATACTAGCACACATGAAGGATTTTTAGTTCTGCAGAATGCTGCTGCTAATTGCCTTCCTCAGCTGGACATGACTCAAACACCTCCAACTCAGGAGTTGGTTGCTAGGGATCTACATGGGTTTGAATGGAGGTTCAGGCATACATATAGAGATCAAGCAAAGATGCATCTTCTTACAAATGGGTGGAGGCAATTTGTCTCATCCAAAAGGTTGAATGCAGGAGATGCTTTTTTGTTGTTAAGGCAACAGAGTGCTACTCATTCATCTGTGAATTCAAGCCAAAGCATGCATATAGCAGTTCTTGCAACTGCCTCACATGCTGTCATGAGTGGCTCTATGATTAGCCAGTTCATTACTCGTTTGAACAAATATCTAGAGGCGATGAACAATGTCTTTGTTGGCACACCATTCAAGATGAGATTTGAGGGAGAGGACCTGCATGAGATATCAAGGTTCTCGGGTTCTGTTATTGGTGCTGGGGATTTCTCTCCTGCGTGGCCGGCCTCTAAATGGAAGTCATTAATGGTTCAATGGGATGAACCCGCTAGTATTCCAAGGCCAGATAGGGTATCTCCTTGGGAGATAGAGCCTTGTGTACCTTCTGCTTCTGTAAAAATTTCTCCGTCACCAACAGTAAAGAACAAAAGGCCCCGGCCTGGAACTACTTCCAGCTCAAGAATGCGAGTGGATGGAATATGTCCAACTTTTGCCTTATTACGTATCTCTCCAAGCTTTTCTTATGAGCCAAGAAACAAGAAAGCTAGTTCATCAACACAAGCTTATGTCTCTGGTTATGATCAAGTTGAAGATGAGGAGAAAAGTGGGAATTACAAGAATATATAG 1032 0.4244 MVEFLTNQEFDPEGIPHFNVPSQILCRVLNIQLLTNPRVPDPTPPPETHKQELHSFCQTLTVSDTSTHEGFLVLQNAAANCLPQLDMTQTPPTQELVARDLHGFEWRFRHTYRDQAKMHLLTNGWRQFVSSKRLNAGDAFLLLRQQSATHSSVNSSQSMHIAVLATASHAVMSGSMISQFITRLNKYLEAMNNVFVGTPFKMRFEGEDLHEISRFSGSVIGAGDFSPAWPASKWKSLMVQWDEPASIPRPDRVSPWEIEPCVPSASVKISPSPTVKNKRPRPGTTSSSRMRVDGICPTFALLRISPSFSYEPRNKKASSSTQAYVSGYDQVEDEEKSGNYKNI 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0036 343 Pfam Auxin response factor 177 237 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele09g0036 343 MobiDBLite consensus disorder prediction 310 343 - -
Lele09g0036 343 MobiDBLite consensus disorder prediction 267 290 - -
Lele09g0036 343 Pfam B3 DNA binding domain 56 146 IPR003340 GO:0003677
Lele09g0036 343 MobiDBLite consensus disorder prediction 311 327 - -
Lele09g0036 343 CDD B3_DNA 54 150 IPR003340 GO:0003677
Lele09g0036 343 FunFam Auxin response factor 193 265 - -
Lele09g0036 343 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 12 293 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele09g0036 343 Gene3D - 53 157 IPR015300 -
Lele09g0036 343 ProSiteProfiles B3 DNA-binding domain profile. 57 167 IPR003340 GO:0003677
Lele09g0036 343 MobiDBLite consensus disorder prediction 265 290 - -
Lele09g0036 343 SMART B3_2 56 157 IPR003340 GO:0003677
Lele09g0036 343 MobiDBLite consensus disorder prediction 329 343 - -
Lele09g0036 343 Gene3D - 193 266 - -
Lele09g0036 343 SUPERFAMILY DNA-binding pseudobarrel domain 47 168 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0036 Lele-ChrLele09 252743 254995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0036 6 282 B3 DNA Binding Superfamily AT3G61830 50.311 4.90e-96 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele09g0036 B3 7.4e-15 CL0405