Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0032 ATGACTCGGGCGAATTTGGCAGGCCAGTTTGGTGACACAACATACACAAAGGTGTTCGTAGGAGGATTGGCTTGGGAGACTCAGAAGGAAACTATGAAGAAATACTTTGAGCAGTTTGGTGAGATCTTAGAGGCTGTCGTCATCACTGACAAAGCTACTGGCAAATCTAAAGGCTATGGATTTGTAACTTTTCGGGAATCAGAGGCCGCCATGAGAGCTTGTGTGGATGCTGCTCCAGTGATAGATTGTAGGAGGGCCAATTGCAACCTCGCTTCTTTGGGTGTCCAGAGATCCAAGCCTTCAACCCCAAAGCATGGAGGAGGAGGGAGGAACTTTAGGGTGATGGGTTCGTTTCAGACAGGATTTGGAGGAGTAGGATCAACTTTTCCTTCAGCTGCTCCACCAACACTTCCTCATTATGCTCTCCAGCAAGGAACTCCTTATAATGTTTATGGGTACTCTCCATACTCACCAGATTACACTTACCCTACGGGGTACTATAGTGTGTATGGAGGAGCCACCCAGTACCCACTGTATGGAACCGGACCAGGAGGCATGATGACCAGTGCCGCGGCAGCAGCCACCGCCATCTACCCATACCTGCAGGTTGGAGAAGGGAGCGGCAGTGGCGTAACCGGCGGCTACACTTCCGGTCAGGGCTACGGTGTGTACTACCCGCCACAGCTGTTTCAGTACTCTCCCATTACCTCATCTGCTGGCTACGCCCAGCACTATGCTCCACCCATGTCTCTTGCACCTTCGCCAGCTTTGCAATCAGGCGTGAAGATGGCTCTTCAAGCTCCTCCAATTCCACATCGTTAG 822 0.5146 MTRANLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKATGKSKGYGFVTFRESEAAMRACVDAAPVIDCRRANCNLASLGVQRSKPSTPKHGGGGRNFRVMGSFQTGFGGVGSTFPSAAPPTLPHYALQQGTPYNVYGYSPYSPDYTYPTGYYSVYGGATQYPLYGTGPGGMMTSAAAAATAIYPYLQVGEGSGSGVTGGYTSGQGYGVYYPPQLFQYSPITSSAGYAQHYAPPMSLAPSPALQSGVKMALQAPPIPHR 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0032 273 PANTHER BOULE-RELATED 3 252 IPR037366 -
Lele09g0032 273 CDD RRM_RBM24_RBM38_like 16 91 - -
Lele09g0032 273 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 100 IPR000504 GO:0003723
Lele09g0032 273 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 10 97 - -
Lele09g0032 273 Gene3D - 5 113 IPR012677 -
Lele09g0032 273 SUPERFAMILY RNA-binding domain, RBD 12 109 IPR035979 GO:0003676
Lele09g0032 273 SMART rrm1_1 17 89 IPR000504 GO:0003723
Lele09g0032 273 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 73 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0032 Lele-ChrLele09 226130 231426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0032 12 189 C2H2 Transcription Factor Family AT2G19380 28.934 3.35e-13 67.4