Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0030 ATGCCGAGATTGGGTCTTCTTTCAGCCGATATTGATTTTGATGACGTAGATGATAAATCATGGAGTGGAAGAGTCAATAGGATGGCTTGGAGGCTTGTAGAAACGAGGGAGCTAGCATTAAAGATGCGAGAGGCAATGGTGGAAGCAGTGGGAATGGAGGAAAAGGAAATGAGAGAGCTATTTGAAGAAGGTTGCCAATCAATGAGGATGAACTATTACCCACCATGCCCTCAACCAGAGCTTGTGAATGCATTGAGCCGTCATTCAGGTGCACTTGTGGGAAAATGGAGAAGTGAGGAAGGCATGAGCTCTACTTATGTGGGACCCATAATAATGGAACCCTCAAGCTCTAAAATTCCATTGTTCACCCCGAAGAGCTCTCTGATCCCAGATTTATCGTCGCCATTATCAAACCCAGAAGATCAGAGATCTAAGGTTGGAGTTGAATGGAGCTGGGAAGAGAACAAGGCATTTGAGAATGCTTTAGCGGAGTTTGGTTTTGAATCTGAACTGCTACTTCCGAATCTTGCTTTGAGAATCCCAGCGAAAAGCATATCTCAGTTGGAAGAGCATCTGAAAGCTCTGGAAGATGACATTAACTTGATTGAGTCGTCAGATTTTGAAGAAATTCTCAACCTCGTAAAGAGTGACGACAACACAGACGATTCAAGCCAACAAGGCAGCAAGAATAATAATGAACAACAAGAAGCTCCTAAGAAACCAGCAGAATCATCAAGATCTGTTCCTAGGCAACGTAGAAAAGGAACCCCTTGGACCAAGACTGAACATGAGATGTTCTTAGTGGGACTTGACCGCTATGGAAGAGGTGATTGGAGGAGCATATCAAAGTACTTAGTGCCATCTAAAACTCCAACTCAAGTGGCAAGTCATGCACAAAAGTACTTTCTCAAACTTGAAAACCCCAAGTCTCGTCCGAGAAAAGACGGTTCATTCATGCGAACGGTGGATGATTCCCCAAAGGCGGCGGCGACAAATGCGCAACTTACCATCTCCGATGACAAGAAGCCATGA 1032 0.4448 MPRLGLLSADIDFDDVDDKSWSGRVNRMAWRLVETRELALKMREAMVEAVGMEEKEMRELFEEGCQSMRMNYYPPCPQPELVNALSRHSGALVGKWRSEEGMSSTYVGPIIMEPSSSKIPLFTPKSSLIPDLSSPLSNPEDQRSKVGVEWSWEENKAFENALAEFGFESELLLPNLALRIPAKSISQLEEHLKALEDDINLIESSDFEEILNLVKSDDNTDDSSQQGSKNNNEQQEAPKKPAESSRSVPRQRRKGTPWTKTEHEMFLVGLDRYGRGDWRSISKYLVPSKTPTQVASHAQKYFLKLENPKSRPRKDGSFMRTVDDSPKAAATNAQLTISDDKKP 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0030 343 MobiDBLite consensus disorder prediction 217 238 - -
Lele09g0030 343 ProSiteProfiles SANT domain profile. 258 308 IPR017884 -
Lele09g0030 343 FunFam transcription factor MYB1R1 256 307 - -
Lele09g0030 343 Pfam Myb-like DNA-binding domain 257 302 IPR001005 -
Lele09g0030 343 MobiDBLite consensus disorder prediction 304 321 - -
Lele09g0030 343 SUPERFAMILY Clavaminate synthase-like 32 89 - -
Lele09g0030 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 250 306 IPR017930 -
Lele09g0030 343 CDD SANT 257 302 IPR001005 -
Lele09g0030 343 Gene3D - 142 208 - -
Lele09g0030 343 Coils Coil 185 205 - -
Lele09g0030 343 MobiDBLite consensus disorder prediction 239 260 - -
Lele09g0030 343 SMART sant 254 304 IPR001005 -
Lele09g0030 343 SMART sant 146 198 IPR001005 -
Lele09g0030 343 SUPERFAMILY Homeodomain-like 251 307 IPR009057 -
Lele09g0030 343 MobiDBLite consensus disorder prediction 303 343 - -
Lele09g0030 343 ProSiteProfiles Myb-like domain profile. 250 302 IPR001005 -
Lele09g0030 343 MobiDBLite consensus disorder prediction 217 260 - -
Lele09g0030 343 Gene3D - 256 307 - -
Lele09g0030 343 Gene3D - 20 92 IPR027443 -
Lele09g0030 343 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 144 313 IPR043363 -
Lele09g0030 343 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 254 304 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0030 Lele-ChrLele09 204540 210410 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele09g0030 Myb_DNA-binding 2e-10 CL0123