Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0027 ATGGGTTCTTCGAATAACGGTGGGGTGCCGCCGGGTTTCCGGTTTCATCCGACAGATGAAGAGCTTCTTCATTATTACCTGAAGAGGAAAGTGAACTTTCAGAAGTTTGACATGGAGGTCATTAGAGAAGTGGACTTGAACAAGATTGAGCCTTGGGACTTGCAAGAGAGGTGTAGGATAGGATCAACACCACAGAACGAGTGGTACTTCTTCAGTCACAAGGACAGGAAGTATCCGACGGGGTCGAGGACGAACAGGGCGACGAACGCCGGCTTCTGGAAGGCGACAGGACGAGACAAGTGCATCAGAAACAGCTTCAAGAAGATCGGCATGAGGAAAACTCTCGTCTTCTACAGAGGCCGAGCTCCTCATGGCCAGAAAACTGACTGGATCATGCATGAATATCGCCTCGAAGATGTGGACGACACTCAAGCTAATCCCAATGAAGATGGGTGGGTGGTTTGCAGAGTGTTCAAGAAGAAGAACCTATTCAAGATTGGGAATGAAGGAAGCTCCGTGCATAACGCAGACCAACAACTCAACAATTCCTCAAGCATCAATCAGCCCCGCTCCTTCATGCACAGAGAGAGCCAATACTTACTCCATCATCATCATCATCATCAACAGCAACAAAACCCTAGAAACTCTTCTGGCTTCCAGCTCGAAAAACCTGAGCTTTCTCTTCATTATCCTCCTCCTCACTTGCAAAACCCTCAATACTCCCTCTTCCAGGCTCAACACCTCCTTCCTCCTGCGGCCCACTACAGTTCATATTCATCAGCCCTACCTTCAGACACACCTCCCATGGCCGCCAAACAACTCATGACGAACCCGGCCGCCGGGGACTGCGATAGTGGCAGCGAGGGCTTGAGGTACCAAGTTTCAGAGACTGCAAATATGGAGGTTGGCACGTGTGAGCCCGCAGGTCATCAAGAGATTAATGAAACAGCAAGAGAAGATCAAGGGTTTAATGAATGGGGCGTGCTTGATAGGCTTGTGGTCACTTCTCATCATCTTGGAAATGAAGAATCATCCAAAGGGGTTAGGTTTGAGGATGCAAATAATAATCCACAATCTGTTCATCAGATGAATCAGCAGCAGCAACCTTCATTGCGTGGAGAAGTCGACTTTTGGGGCTATGGAAAGCAATAA 1152 0.4852 MGSSNNGGVPPGFRFHPTDEELLHYYLKRKVNFQKFDMEVIREVDLNKIEPWDLQERCRIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNSFKKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLEDVDDTQANPNEDGWVVCRVFKKKNLFKIGNEGSSVHNADQQLNNSSSINQPRSFMHRESQYLLHHHHHHQQQQNPRNSSGFQLEKPELSLHYPPPHLQNPQYSLFQAQHLLPPAAHYSSYSSALPSDTPPMAAKQLMTNPAAGDCDSGSEGLRYQVSETANMEVGTCEPAGHQEINETAREDQGFNEWGVLDRLVVTSHHLGNEESSKGVRFEDANNNPQSVHQMNQQQQPSLRGEVDFWGYGKQ 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0027 383 MobiDBLite consensus disorder prediction 342 383 - -
Lele09g0027 383 FunFam NAC domain-containing protein 18 164 - -
Lele09g0027 383 ProSiteProfiles NAC domain profile. 9 160 IPR003441 GO:0003677|GO:0006355
Lele09g0027 383 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Lele09g0027 383 MobiDBLite consensus disorder prediction 350 372 - -
Lele09g0027 383 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 226 - -
Lele09g0027 383 SUPERFAMILY NAC domain 8 160 IPR036093 GO:0003677|GO:0006355
Lele09g0027 383 Gene3D NAC domain 18 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0027 Lele-ChrLele09 179249 181784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0027 3 379 NAC Transcription Factor Family AT1G33280 52.910 5.36e-123 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele09g0027 NAM 4.3e-37 No_clan