Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0019 ATGGCGTATGCGATGAAGCCTACTAAACCGGGTTTGGAGGAACCCCAAGAGCAGATTCACAAGATTAGGATTACGCTGTCCTCCAAGCACGTGAAAAATCTTGAGAAAGTTTGTGGGGATTTAGTTCGTGGTGCCAAGGACAAGAGGCTTAGGGTCAAGGGACCTGTGAGAATGCCCACTAAAGTTCTTCACATCACCACCAGGAAATCTCCATGTGGTGAAGGTACCAACACCTGGGATCGGACAAACTTCGATATTTCTATCAGTGAAATAGTATTGGACAAAGCAGCAGGACTGCCATTTGTGTAG 309 0.466 MAYAMKPTKPGLEEPQEQIHKIRITLSSKHVKNLEKVCGDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRTNFDISISEIVLDKAAGLPFV 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0019 102 Gene3D Ribosomal protein S10 domain 5 97 IPR036838 -
Lele09g0019 102 PRINTS Ribosomal protein S10 family signature 21 34 IPR001848 GO:0003735|GO:0005840|GO:0006412
Lele09g0019 102 PRINTS Ribosomal protein S10 family signature 56 71 IPR001848 GO:0003735|GO:0005840|GO:0006412
Lele09g0019 102 SUPERFAMILY Ribosomal protein S10 21 89 IPR036838 -
Lele09g0019 102 SMART Ribosomal_S10_2 23 100 IPR027486 -
Lele09g0019 102 Pfam Ribosomal protein S10p/S20e 23 82 IPR027486 -
Lele09g0019 102 ProSitePatterns Ribosomal protein S10 signature. 45 60 IPR018268 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Lele09g0019 102 PANTHER 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER 14 95 IPR001848 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0019 Lele-ChrLele09 123180 126725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0019 1 94 Cytoplasmic Ribosomal Protein Gene Family AT3G47370 80.000 6.39e-49 149