Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0010 ATGATTTCATTTTTCTTTTTGGAAGTTTTCATCTCAAACTCTGATCATGAAATGGTTTTCCTGCTTGGCATGGATGGCCACATGGATGTTGAAAACAGGGGAATGGGAACCTCTGGGAACGCCAGTTTTAGTGTGTATGAAGTTCAAACAATTGAAGAACCATACAATGATGAGAGGTGTGGATTGTTAGGGAGTTCTTCTCAGGGAGAGTTAGGCATTTGTGAGGACCATGCCATCCAAGAACCATACGAGGGTATGGAATTTGAATCTGAAGATGCTGCTAAAATATTCTATGATGAATATGCTCGACATGTAGGGTTTGTCATGCGGGTTATGTCTTGTAGACGCTCTGAAAGGGATGGAAGGATTCTTGCCCGCAGGCTTGGATGCAATAAGGAGGGTCATTGTGTCAGCATTCGAGGGAAATTCGGACCTGTTCGAAAGCAAAGGCCAAGCACAAGAGAAGGTTGTAAGGCAATGATTCATGTCAAATATAATAAGTCGGGAAAATGGGTGATAACTAAGTTTGTGAAAGATCATAATCACCCACTGATAGTTTCTCCTCGCGAAGCTCGCCAAACAATGGATGAGAAGGATAAGAGGATACAGGAATTAACAGCAGAGCTTCGGAATAAAAAGCGGCTGTGTGCTACATATCAAGAACAGCTAACTGCTTTTATGAAAGTTGTCGAAGAGCACAATGAAAAGCTGTCTGACAAAATTCATCATGTTATTAATAATTTAAAAGAATTTGAGTACATAGAGCAGGAGCTCTTGCCAAAGAGAAACAGGGATGGCTCTTGTTTCCTCTTATTATTGCTTCTAAAGCTGAATGATGACCTGACCTCTCCGTGTTTCGCAACTTGCCCTACGAGAATCGTTGCTTTCTCCGAGTACCACCCTTTCACGGCCCTACCAGAATCGTACAATTTGTCGTATGGACACCTGTCAGGGTCTGAGAACCAACATCCTTCGAGCGTGTGGCCTCCTATATCAGATGAGAACAGAGAGGCCCGTTTATAA 1023 0.4272 MISFFFLEVFISNSDHEMVFLLGMDGHMDVENRGMGTSGNASFSVYEVQTIEEPYNDERCGLLGSSSQGELGICEDHAIQEPYEGMEFESEDAAKIFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCVSIRGKFGPVRKQRPSTREGCKAMIHVKYNKSGKWVITKFVKDHNHPLIVSPREARQTMDEKDKRIQELTAELRNKKRLCATYQEQLTAFMKVVEEHNEKLSDKIHHVINNLKEFEYIEQELLPKRNRDGSCFLLLLLLKLNDDLTSPCFATCPTRIVAFSEYHPFTALPESYNLSYGHLSGSENQHPSSVWPPISDENREARL 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0010 340 Pfam FAR1 DNA-binding domain 97 185 IPR004330 -
Lele09g0010 340 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 70 255 - -
Lele09g0010 340 Coils Coil 195 222 - -
Lele09g0010 340 MobiDBLite consensus disorder prediction 319 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0010 Lele-ChrLele09 83797 90432 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele09g0010 FAR1 7.1e-28 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0010 09 83797 90432 Lele11g0009 11 1077129 1079187 hybridization
Lele09g0010 09 83797 90432 Lele12g1236 12 19272751 19273562 hybridization