LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele08g2768	ATGGAACTTCAACGATGGAAATTCGAAGAGCAAAAGAAATTAGAAGAGGCAAGGATGACTGAAAAAGCAGCACTGGCACTTGCAGAGAGAGAGAAAGCAAAGTGTAGAGCCGCCCTTGAGGCAGCAGAAGCATCCAAGAAAATTGCGGAACTGGAAGCACACAAAAGATTGAATGCAGAGATGAAAGCCCTGAATGAATCAGATCAGAAAAAGAAGGCACTAGATACTTTTTCACAAGGTAGTGCCAGGTACAGAAGATATACTATTGAGGAGATCGAAGAAGCAACAAACTGTTTTGTGGACTCGCTCAAGATTGGGGAAGGAGGGTATGGGCCAGTATATAGGTGCGAACTAGATCTCACGCCAGTTGCAGTGAAAGTCCTAAGGCCAGATGCAGCTCAAGGAAGGTCACAGTTTCAGCAAGAGGTCGAAGTGTTGAGTTGCATTCGTCATCCAAACATGGTTCTCCTCTTGGGAGCATGCCCGGAGTATGGGTGCCTTGTGTATGAGTACATGGCTAATGGAAGTTTGGAGGACTGCCTCTTCCGAAAACGTAACACGCCACCTCTCCCCTGGCAGTTAAGATTTCGAATAGCGGCAGAGATCGCCACCGGCCTCCTTTTCCTTCATCAGACAAAACCAGAACCACTTGTTCACCGGGATTTAAAGCCTGCCAACATTCTGCTAGATCGTAACTTTGTGAGCAAGATCAGTGATCTGGGATTGGCCAGGCTCGTCCCTCCTTCGGTTGCAGACAGTGTAACTCAGTACCGCATGACATCAACTGCAGGAACTTTCTGCTATATTGATCCTGAGTACCAGCAAACGGGCATGCTCGGAATTAAATCTGACGTATACTCTCTGGGGATCATGCTCCTACAAATGATAACGGCAAAGCCCCCGATGGGTTTGACTCATCATGTTGGACGAGCCATAGAAAACGGCACTTTCACGGAGATGCTTGACCCAGCTGTTGAAGACTGGCCGGTGGAGGAGGCCCTGCATTTTGCCAAGCTTTCTCTGCAGTGTGCGGAAATGAGGAGAAAAGACAGACCTGATCTTAAAAAAGTTGTACTGCCTCAGCTCAATAAGCTGAGAGACTTTGCCGAAGATAACATGCCCATGATGATCATGTTTGGACGTAGTGCAGGATTCACCCCAAATCGTACCAGCAGTCCCACAACCTCCACAGTTCAAGAGTTTTTGAATGATTCCCAGTCTCTTTCTGGAATCTCCGGATATGAAAGCCGCTCAAGCACGTCCTCATTGGGGAGAATGTGA	1281	0.477	MELQRWKFEEQKKLEEARMTEKAALALAEREKAKCRAALEAAEASKKIAELEAHKRLNAEMKALNESDQKKKALDTFSQGSARYRRYTIEEIEEATNCFVDSLKIGEGGYGPVYRCELDLTPVAVKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLEDCLFRKRNTPPLPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDLGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDVYSLGIMLLQMITAKPPMGLTHHVGRAIENGTFTEMLDPAVEDWPVEEALHFAKLSLQCAEMRRKDRPDLKKVVLPQLNKLRDFAEDNMPMMIMFGRSAGFTPNRTSSPTTSTVQEFLNDSQSLSGISGYESRSSTSSLGRM	426

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele08g2768	426	PANTHER	OS02G0152300 PROTEIN	1	389	-	-
	Lele08g2768	426	SMART	serkin_6	99	362	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele08g2768	426	Pfam	Protein kinase domain	102	357	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele08g2768	426	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	217	229	IPR008271	GO:0004672\|GO:0006468
	Lele08g2768	426	Gene3D	Phosphorylase Kinase; domain 1	66	171	-	-
	Lele08g2768	426	Coils	Coil	11	52	-	-
	Lele08g2768	426	Gene3D	Transferase(Phosphotransferase) domain 1	172	378	-	-
	Lele08g2768	426	FunFam	U-box domain-containing protein 51	172	372	-	-
	Lele08g2768	426	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	71	171	-	-
	Lele08g2768	426	ProSiteProfiles	Protein kinase domain profile.	99	362	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele08g2768	426	SUPERFAMILY	Protein kinase-like (PK-like)	78	358	IPR011009	-
	Lele08g2768	426	CDD	STKc_IRAK	105	358	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele08g2768	Lele-ChrLele08	32958094	32959455	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele08g2768	2	374	Receptor kinase-like Gene Family	AT5G12000	71.046	0.0	540

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Lele08g2768		Pkinase	1.3e-40	CL0016