Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2767 ATGAAGATGCAGCCAGACGGTACCGGAGCTGGGGCTGCCTCAGCCGCTGCTCCAACGAACCCTTGCGAAGGAGCAGAGAAGAAGAGCATAAATCCAGAGCTTTGGCAAGCTTGTGCGGGGCCGCTGGTGAACCTGCCTCCAGCTGGTACTCACGTGGTGTACTTCCCTCAAGGTCACAGTGAACAGGTTGCAGCATCTGTAAAGAAGGATGTGGATGGTCAGATCCCAAACTATCCAAATCTCCCTTCTAAGTTACTCTGTCTCCTTCACAATGTCACCTTGCATGCTGACCCGGAAACTGACGAAGTATATGCTCAGATGACACTTCAACCAGTGCCTTCTTTTGACAAGGATGCATTGTTAAGATCTGATCTTGCTCTCAAGTCAAGTAAACCCCAGCCTGAATTCTTCTGTAAACAATTGACGGCGAGTGATACAAGTACACATGGAGGCTTTTCTGTCCCACGCCGTGCAGCAGAGAAGATTTTCCCTGCTCTTGATTACTCTATGCAACCACCTGCTCAAGAACTTGTGGCAAGGGATTTGCATGACAATGTCTGGACATTTCGCCATATATACCGTGGACAACCAAAGCGTCACTTACTTACAACTGGATGGAGTCTATTTGTCAGTGGAAAGAGGCTATTTGCTGGAGACTCTGTTTTGTTTATAAGAGATGAAAAGCAGCAGCTTCTTCTGGGTATCAGGCGAGCTAACAGACAACCCACCAATATATCATCTTCGGTGCTATCAAGTGATAGTATGCATATTGGAATTCTGGCAGCAGCAGCTCATGCTGCTGCAAACCACAGCCCCTTCACTGTGTTTTATAACCCTAGGGCTAGCCCCTCAGAATTTGTTATTCCTTTAGCAAAGTACTACAAGGCGGTGTATAGCCATCAAATATCACCTGGCATGCGGTTCCGAATGATGTTTGAAACTGAAGACTCAGGAACAAGAAGGTATATGGGTACAATTACTGGGATCTGTGATCTGGATCCTGTAAGATGGAAAAACTCGCAATGGCGCAATTTGCAGGTCGGTTGGGATGAATCAACTGCTGGAGAAAGACGAAGCCGGGTTTCAATCTGGGAAATTGAACCAGTGACAGCTCCATTTTTCATCTGTCCACCTCCATTCTTCAGGTCTAAGCGAGCAAGACAACCCGGAACGCCTGATGAAGATCCTTCTGATTTTGATAACCTTTTTAAGCGGACGATGCCTTGGCTTGGTGATGATATATGCATGAAGGATCCTCAAGCACTCCCTGGCCTAAGCTTAGTTCAATGGATGAACATGCAGCAAAATCCTGCTCTGTCTAGCTCATTGCAGCCAAATTACATGCAATCCTTGTCGGGATCTGTTCTGCAAAACCTTCCTGGTGCAGACATTGCACGTCAGCTGGGATTTTGTGCTCCACAGGTTTCTCAGTCAAGCAATGTAGCTTTCAATACTCAGAGGTTACTTCAGGCCCCACACGTTGATTATCTTCAGAAGATACCATCTGCGTCTAGTCCCTTAGGAACGGTCATGCTGCCACCACAACAATTGGGTGATATCACACAGCAGCCTAGACAGAATATAGGCAATCAAACTCTACCGCAGAGTCAAGTTCAGAGCCAACTTCTGCATGCTCAAAATATTGTTCAGCCTAACAATATTCTTCCACAGCAGCAACCATCCATCCAAAACCATCAACTGCATAGAAACCTCTCTCAGAACCTGTCACAGCCGCAGCAGCAACAGTCAGTTATGGGTCAGAATCAACAGCAGAATCTTATTCAGTCCTCAATGCCTGATCATGTCAATCAACAGTTGCAGATGTCTGACAACCAGATTCAGCTTCAATTATTACAGAAGCTTCAACAGCAACAGCAAACACTCTTGGCACAGCAGTCAGTATTGCAGCAGTCCACTCAACTCAATCAAATCCAAGATCAGCAGAGGCAGCTTCCAACTCAGAACTTCTCTAGGGCCCTAACTTCTAGTAAAGTGCTAGAAATTCCTCCGATACTTCAAAACTCATTTCCTGATTCTAATTCTATTCCACATCAGATGAAGAATAATGGCCAGACCAATAATGTTCAGTTCTCTTATCCAACCCAGCAGGCAAAGATTCAACAACAGCAACCTGGTACACTGTCTGAGATGTCTGGGCATGTGGGACTTCCCCCTGCTCCTACTGCCAACAAACTGTCTGCGGCTGGCAGTAGCATATTAGCTGGTGCAGCTGGAGCAGGGCAGTCTGTAATTACTGACGACATTCCATCTTGTTCCACTTCACCTTCCACTAATAACTGCGCCAAAACTCTTCCATATATGAATTCCCGGATCCATAGGAATAACATGATAGGGGATGATATGGCTCAATCTGCAGCCACGATCTTAAGTCCTAGTGCCTTAGAGACCATGTCATCAAATGTAAGCTTGGGGAAAGATTTTCATCCAAAGTCTGAAGTTAAGCCTTCTTTAAATATATCCAAAAGTCAAAATCAAGGGAATTTTTCCGCTCATGTATACTTAAATGGTGGAGCTGTGCAGACAGATTATTTGGATACATCATCTTCTACAACTTCAGTTAGCCTTTCTCGTAATGACACTTATATGCATCAGAATAACAACCCATTATCTTACAATCCACAGTCAATGTTATTTAGAGACAATAATCAAGATGGGGAAATTCAGCTAGATGCTAGGAGCAATGTTCCATTTGGCAATAATATTGATGGTCAATTGGTAGTGCCGCTAAATCCAGATTCTCTTTTGACCAAAGGCACAATAGGGCTGGGAAAGGATTTGTCAAATAACTTTTCTTCAGGAGGCATGCTTGGTAACTATGAGGATAACAGAGATGCTCAGCAGGAACTCTCTTCATCAATTGTTTCACAGGCATTTGGAGTCCCTGATATGACCTTTAATTCAATTGATCCCACCATGAATGATAGTAGTTTCTTAAATAGGGGTTCATGGGCCCCACCTCCTCCTCCACCACCACAGTTTCCGCGAATGAGAACGTATACCAAGGTATACAAACGTGGTGCTGTTGGTAGATCTATAGACATAACCCGGTATTCAGGTTATGAGGAGCTTAAACAGGATTTGGCTCGCAGATTTGGCATAGAGGGACGGTTGGAGGACCGGCAAAGGATAGGCTGGAAACTTGTTTATGTGGATCATGAAAATGATGTTTTGCTAGTGGGGGATGACCCTTGGGAGGAGTTTGTGAACTGTGTCCGCTGCATTAAAATACTTTCCCCTCAAGAGGTGCAACAGATGAGTTTGGATGGAGATTTTGGCAACGATGGCCTTCCAAATCAAGCCTGTAGCAGTTCTGATGGTGGAAATACCTAA 3351 0.4485 MKMQPDGTGAGAASAAAPTNPCEGAEKKSINPELWQACAGPLVNLPPAGTHVVYFPQGHSEQVAASVKKDVDGQIPNYPNLPSKLLCLLHNVTLHADPETDEVYAQMTLQPVPSFDKDALLRSDLALKSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPALDYSMQPPAQELVARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANHSPFTVFYNPRASPSEFVIPLAKYYKAVYSHQISPGMRFRMMFETEDSGTRRYMGTITGICDLDPVRWKNSQWRNLQVGWDESTAGERRSRVSIWEIEPVTAPFFICPPPFFRSKRARQPGTPDEDPSDFDNLFKRTMPWLGDDICMKDPQALPGLSLVQWMNMQQNPALSSSLQPNYMQSLSGSVLQNLPGADIARQLGFCAPQVSQSSNVAFNTQRLLQAPHVDYLQKIPSASSPLGTVMLPPQQLGDITQQPRQNIGNQTLPQSQVQSQLLHAQNIVQPNNILPQQQPSIQNHQLHRNLSQNLSQPQQQQSVMGQNQQQNLIQSSMPDHVNQQLQMSDNQIQLQLLQKLQQQQQTLLAQQSVLQQSTQLNQIQDQQRQLPTQNFSRALTSSKVLEIPPILQNSFPDSNSIPHQMKNNGQTNNVQFSYPTQQAKIQQQQPGTLSEMSGHVGLPPAPTANKLSAAGSSILAGAAGAGQSVITDDIPSCSTSPSTNNCAKTLPYMNSRIHRNNMIGDDMAQSAATILSPSALETMSSNVSLGKDFHPKSEVKPSLNISKSQNQGNFSAHVYLNGGAVQTDYLDTSSSTTSVSLSRNDTYMHQNNNPLSYNPQSMLFRDNNQDGEIQLDARSNVPFGNNIDGQLVVPLNPDSLLTKGTIGLGKDLSNNFSSGGMLGNYEDNRDAQQELSSSIVSQAFGVPDMTFNSIDPTMNDSSFLNRGSWAPPPPPPPQFPRMRTYTKVYKRGAVGRSIDITRYSGYEELKQDLARRFGIEGRLEDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNDGLPNQACSSSDGGNT 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2767 1116 SUPERFAMILY CAD & PB1 domains 1016 1082 - -
Lele08g2767 1116 ProSiteProfiles PB1 domain profile. 1004 1088 IPR000270 GO:0005515
Lele08g2767 1116 FunFam Auxin response factor 999 1093 - -
Lele08g2767 1116 Gene3D - 1000 1093 - -
Lele08g2767 1116 Pfam AUX/IAA family 1005 1089 IPR033389 -
Lele08g2767 1116 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 26 1093 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele08g2767 1116 MobiDBLite consensus disorder prediction 1 27 - -
Lele08g2767 1116 Gene3D - 135 238 IPR015300 -
Lele08g2767 1116 SMART B3_2 137 239 IPR003340 GO:0003677
Lele08g2767 1116 MobiDBLite consensus disorder prediction 1095 1116 - -
Lele08g2767 1116 Pfam B3 DNA binding domain 137 238 IPR003340 GO:0003677
Lele08g2767 1116 CDD B3_DNA 136 228 IPR003340 GO:0003677
Lele08g2767 1116 Gene3D - 301 372 - -
Lele08g2767 1116 Pfam Auxin response factor 263 346 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele08g2767 1116 FunFam Auxin response factor 135 239 - -
Lele08g2767 1116 ProSiteProfiles B3 DNA-binding domain profile. 137 239 IPR003340 GO:0003677
Lele08g2767 1116 SUPERFAMILY DNA-binding pseudobarrel domain 126 266 IPR015300 -
Lele08g2767 1116 FunFam Auxin response factor 301 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2767 Lele-ChrLele08 32950171 32956103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2767 25 484 B3 DNA Binding Superfamily AT1G19220 73.434 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele08g2767 B3 1.7e-19 CL0405