Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2750 ATGGGGAGGAAATGCTCACATTGTGGGAACATAGGCCACAATTCCAGGACGTGCTCAGCTCTGAGAGGCGCTTTTGTAGGGCTTCGACTCTTCGGCGTTCAATTCGACATATCGTCTTCTTCTTCTTCTTGTGTTGCCGCCATCAAGAAAAGCTTTAGCGTGGACTCTCTGCCCTCTTCCTCATCTCCTTCTTCCTCTTTCTCTTCCTCCAGATTAGCCATCGACGACCACTCCAATAGAGTCTCCCTCGGCTATCTTTCCGACGGCCTCCTCGGTCGAGTCCAAGACAGGAAAAAAGGAGTTCCATGGACAGAAGAGGAGCACCGATCGTTCCTGGTAGGGCTGGAGAAGCTGGGAAAAGGAGACTGGAGAGGAATCTCTAGGAACTATGTCACCACAAGAACCCCTACTCAAGTTGCTAGCCATGCTCAGAAATACTTCCTTCGACTTGCAACCGTTCACAAGAAGAAGCGACGTTCTAGTCTTTTTGATATGGTTGGCAGCGGCAGTCAAGGTCCTCCTCCTCATCATCATCATCCTAAGGCGGCAGGCGAATCGGTGGAGACTATGGACACTGATTTGCAGCTTCTTGGCCCTCAAATGGAAGCCAACAACAACAAGAACAAATCATCAGATGATAACAAGCAAATACAAGAAATTAGCGATGATGATTATAATTCTCAACAAGTGTTGAAATCTTCCAATGCATCATCAGCATCACTTGATCTAGAGCTGAGTCTTGCAGCCCCCAATAACACTCTCCAGAAGCAAAATACCCTTCTTGGTCCAATCATCAGCGTCACTTGA 807 0.4783 MGRKCSHCGNIGHNSRTCSALRGAFVGLRLFGVQFDISSSSSSCVAAIKKSFSVDSLPSSSSPSSSFSSSRLAIDDHSNRVSLGYLSDGLLGRVQDRKKGVPWTEEEHRSFLVGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRLATVHKKKRRSSLFDMVGSGSQGPPPHHHHPKAAGESVETMDTDLQLLGPQMEANNNKNKSSDDNKQIQEISDDDYNSQQVLKSSNASSASLDLELSLAAPNNTLQKQNTLLGPIISVT 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2750 268 ProSiteProfiles Myb-like domain profile. 95 147 IPR001005 -
Lele08g2750 268 FunFam transcription factor MYB1R1 101 152 - -
Lele08g2750 268 Gene3D - 101 153 - -
Lele08g2750 268 MobiDBLite consensus disorder prediction 164 187 - -
Lele08g2750 268 ProSiteProfiles SANT domain profile. 103 151 IPR017884 -
Lele08g2750 268 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 98 149 IPR006447 GO:0003677
Lele08g2750 268 CDD SANT 102 147 IPR001005 -
Lele08g2750 268 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 95 151 IPR017930 -
Lele08g2750 268 Pfam Myb-like DNA-binding domain 102 147 IPR001005 -
Lele08g2750 268 PANTHER TRANSCRIPTION FACTOR KUA1 3 226 - -
Lele08g2750 268 ProSiteProfiles Zinc finger CCHC-type profile. 3 18 IPR001878 GO:0003676|GO:0008270
Lele08g2750 268 SMART sant 99 149 IPR001005 -
Lele08g2750 268 SUPERFAMILY Homeodomain-like 96 151 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2750 Lele-ChrLele08 32859267 32860347 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele08g2750 Myb_DNA-binding 4e-11 CL0123