Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2726 ATGGCCAGGAAGAGAAAGAGCATTATTAGTGTTGAAGAGGCAGGGGAAGAGAAGAGTGGCAGTGAGGGAAGCATGGGGTGGGAGGAGATGGTGAAGGAGGCTGCCGGGCTGGGAGGTCTCCGACGAGCCCGAAAGCGATTCGTGGGGGTCCGGCAGCGGCCTTCGGGGCGGTGGGTGGCGGAGATAAAAGACACCATACAGAAGATAAGGGTGTGGCTTGGCACTTTTGACACTGCAGAGGAAGCAGCCAGAGCTTATGATGAAGCCGCTTTCTTGCTTCGAGGAGCCAACACCAGAACAAATTTCTGGCCATGTCAATCTCAATCCAATTCTTCAACTCCTGCTCTTTCTTCAAAAATCACCAATCTCCTTCTCCAAAGACTCCATGCAAGAGACCACCAAATCCATAACTCTTCACCACCTTCTTCCTCCTCCTCCTCTGTTTCGTCCCTGCTTATAAGTCAGCAACAGAACCAAGAAGCGGAGGAAAAAACAGAGTTTTCAATTGACCAGTTCACTGACTTTCTTAATGATCCTGAGAATTATTACACCACAACAAGCAGCAACAACAGTGAACAGTTTGATTACATTACTTGTAGTTTTGAGTCGTGTTTGACCGAGAACAACGAGTGCAAGGAAGGAGCAGAGATAATTGACGATTCGGGTGTGGTAAAAGAGGAAGAAAGCAGTAGCGAGGTTGATATGGGGTCGCAGGATTTTGGGTTTCTGGACAGCGTGGTTCCATCATCATGGTACAACTATTCACCATTTGAGATGGCTCGAGAAATGAAGGAGGAGGTGGAGGATGAGGGAGAGAGCTATGGTGGTGGGGATGAGCCTTCTGTGCTGAGAGCAGCCGTGAAGAGGATGAAGTATGAGAGGAAGTTCTCTGCTTCTCTGTATGCCTTCAATGGGATATCAGAATGCTTGAAGTTGAAACTTGGATCGGCAAACTTGAAGGGAAGAACAGTTTCTGAGCAACTATCTAATCTGCAGATGGCATGTTCCAGTAAGAATAAAGTTGAGAAGAAAGATATCAATACCAAAGAAGAAGAAGAAGAAGAAAGCCCACAAGCGTCAATTGATATTTCTGATTCCTCTTCTTCTTCTTCTGGTAATGATATTGAATTGATTTGGAATTCACTAGATCTTACTCCAATTGCTTTGTTAGCTAATTACTGA 1182 0.4585 MARKRKSIISVEEAGEEKSGSEGSMGWEEMVKEAAGLGGLRRARKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAAFLLRGANTRTNFWPCQSQSNSSTPALSSKITNLLLQRLHARDHQIHNSSPPSSSSSSVSSLLISQQQNQEAEEKTEFSIDQFTDFLNDPENYYTTTSSNNSEQFDYITCSFESCLTENNECKEGAEIIDDSGVVKEEESSSEVDMGSQDFGFLDSVVPSSWYNYSPFEMAREMKEEVEDEGESYGGGDEPSVLRAAVKRMKYERKFSASLYAFNGISECLKLKLGSANLKGRTVSEQLSNLQMACSSKNKVEKKDINTKEEEEEESPQASIDISDSSSSSSGNDIELIWNSLDLTPIALLANY 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2726 393 SUPERFAMILY DNA-binding domain 46 103 IPR016177 GO:0003677
Lele08g2726 393 MobiDBLite consensus disorder prediction 1 23 - -
Lele08g2726 393 MobiDBLite consensus disorder prediction 133 165 - -
Lele08g2726 393 ProSiteProfiles AP2/ERF domain profile. 46 103 IPR001471 GO:0003700|GO:0006355
Lele08g2726 393 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 20 297 - -
Lele08g2726 393 MobiDBLite consensus disorder prediction 340 372 - -
Lele08g2726 393 MobiDBLite consensus disorder prediction 340 354 - -
Lele08g2726 393 SMART rav1_2 46 109 IPR001471 GO:0003700|GO:0006355
Lele08g2726 393 MobiDBLite consensus disorder prediction 1 24 - -
Lele08g2726 393 PRINTS Ethylene responsive element binding protein signature 69 85 IPR001471 GO:0003700|GO:0006355
Lele08g2726 393 PRINTS Ethylene responsive element binding protein signature 47 58 IPR001471 GO:0003700|GO:0006355
Lele08g2726 393 Gene3D AP2/ERF domain 45 103 IPR036955 GO:0003700|GO:0006355
Lele08g2726 393 MobiDBLite consensus disorder prediction 135 162 - -
Lele08g2726 393 FunFam ethylene-responsive transcription factor RAP2-11 45 104 - -
Lele08g2726 393 CDD AP2 45 102 IPR001471 GO:0003700|GO:0006355
Lele08g2726 393 Pfam AP2 domain 46 95 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2726 Lele-ChrLele08 32704297 32705478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2726 44 124 AP2-EREBP Transcription Factor Family AT5G19790 71.429 2.37e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele08g2726 AP2 5.2e-15 CL0081