Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2719 ATGTATGAATTCCACTTTCACTCGAGATTTCCTTCACATGTGAGCAAGCTATCTATAACGATTCACTGCACTTATCCATTCATGGCCCCTAAAAATGGCCATTCCCTCGCGCCGCCGCCGCCGCCGCCGCCTCGTCCGACCATCACTCTCCCGCCCCGACCTTCCATGGAGGCTTTCTTCTCCGGTGGACCCGGTCTAAGTCCTGGTCCCTTGACTCTCGTCTCCAGCTTCTTCTCCGACACGTACCCTGACTCCGATTGCCGCTCTTTCTCTCAGCTGCTCGCCGGAGCCATGGCTTCGCCGCTTGCTCTTGGCGCCAGGCCTAGTTTCCTTCCGGAAAATTCCACCAACAATTCCTCCACTTCTGAGGATGGAGCAGAGAAGAATTTGGGGTTCAAGCAGAGTACACCCATGAATTTGGTTGTTGCTCGTTCCCCAATGTTCCCCATCCCGCCTGGGCTTAGCCCTTCTGGTTTGCTTAATTCTCCGGGCTTCTTTTCGCCGCAGAGCCCCTTTGGGATATCCCACCAACAGGCTCTAGCACAGGTTACAGCTCAAGCTGTCCTAGCACAATCACAAATGCATGCTCAAGCCGATTTTCGCCCATCTGCAGTAACAGCCCCTTCTGAACCATTGGCCGTGCAGCCATCCAGTACTCCAGGTGAAGGATTAGAGGTGCAAGTGGTACCATGGGTATCAGAACCTAAAGGTGCCCTAGTGGAAATATCAGAAATTTCTCATGCTGATAACAAATATCAAGCTTCTTCTATGGGTGTTGACAAACCAGCGGATGATGGCTATAACTGGCGTAAGTATGGGCAGAAGCAGGTTAAGGGGAGTGACTATCCACGGAGCTACTACAAGTGTACACATCTGAACTGCCCTGTAAAGAAAAAGATTGAGCGTGCCCATGATGGCCACATAACTGAAATTATCTATAAAGGCCAGCATAACCATGAAAAGCCTCAGCCAAATAGGCGTGCTGCCAAAGATAATTGTGAATCAAATGAAAATAAAAGCATTCAAGTTATGTCTGAGTCAAATGCACAGGGTTGGGTTGGAAATTCAAATGTGATGGGTGAAAGCATGCCTGACCATTCAATGCCTGAGAGTGACCAGACCTCCAATCAAGAGGCTCGCAGACAGTCATCTGGATCACATGAGAGTGAGGAAGCACTTGATGCACATACTAAAGAAGAAGATGGAGATGTTGGTGAGCCAAAATCAAAAAGGAGGAGCACTGAGGTTGAAGCTACTGAAGCATCTTTGTCCCACAAGACTGTTACAGAATCTAAAATCATTGTACAGACAAGAAGCGAAGTTGATCTGTTAGATGATGGCTACAGGTGGCGCAAGTATGGGCAGAAAGTAGTGAAGGGAAATCCTCATCCAAGGAGTTATTACAAATGCACCTTTGCAGGATGTAATGTGCGTAAGCATGTTGAGAGATCTTCAACAGACCCTAAAGCTGTCATAAATACGTACGAGGGAAAACATAGCCATGATGTGCCTGCTTCTAGACATAGCGGCCACACCGCCTCAGCTACTACCAATTCAATGCCTCTAAAGCAACATAGAGTGACTCCTGGCAACAAAGACCAAAAACCAGCTGTTTTACGCTTAAAAGAAGAGCAAAACGGAGTATAA 1647 0.4797 MYEFHFHSRFPSHVSKLSITIHCTYPFMAPKNGHSLAPPPPPPPRPTITLPPRPSMEAFFSGGPGLSPGPLTLVSSFFSDTYPDSDCRSFSQLLAGAMASPLALGARPSFLPENSTNNSSTSEDGAEKNLGFKQSTPMNLVVARSPMFPIPPGLSPSGLLNSPGFFSPQSPFGISHQQALAQVTAQAVLAQSQMHAQADFRPSAVTAPSEPLAVQPSSTPGEGLEVQVVPWVSEPKGALVEISEISHADNKYQASSMGVDKPADDGYNWRKYGQKQVKGSDYPRSYYKCTHLNCPVKKKIERAHDGHITEIIYKGQHNHEKPQPNRRAAKDNCESNENKSIQVMSESNAQGWVGNSNVMGESMPDHSMPESDQTSNQEARRQSSGSHESEEALDAHTKEEDGDVGEPKSKRRSTEVEATEASLSHKTVTESKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTFAGCNVRKHVERSSTDPKAVINTYEGKHSHDVPASRHSGHTASATTNSMPLKQHRVTPGNKDQKPAVLRLKEEQNGV 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2719 548 Pfam WRKY DNA -binding domain 445 501 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele08g2719 548 Pfam WRKY DNA -binding domain 264 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele08g2719 548 MobiDBLite consensus disorder prediction 110 127 - -
Lele08g2719 548 Gene3D WRKY domain 428 505 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele08g2719 548 Gene3D WRKY domain 249 323 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele08g2719 548 ProSiteProfiles WRKY domain profile. 439 504 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele08g2719 548 SMART WRKY_cls 444 503 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele08g2719 548 SMART WRKY_cls 263 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele08g2719 548 MobiDBLite consensus disorder prediction 498 548 - -
Lele08g2719 548 FunFam WRKY transcription factor 57 430 504 - -
Lele08g2719 548 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 164 525 IPR044810 GO:0003700
Lele08g2719 548 MobiDBLite consensus disorder prediction 383 419 - -
Lele08g2719 548 MobiDBLite consensus disorder prediction 108 127 - -
Lele08g2719 548 FunFam WRKY transcription factor 251 323 - -
Lele08g2719 548 MobiDBLite consensus disorder prediction 201 221 - -
Lele08g2719 548 ProSiteProfiles WRKY domain profile. 264 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele08g2719 548 MobiDBLite consensus disorder prediction 314 334 - -
Lele08g2719 548 SUPERFAMILY WRKY DNA-binding domain 436 504 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele08g2719 548 MobiDBLite consensus disorder prediction 314 427 - -
Lele08g2719 548 MobiDBLite consensus disorder prediction 507 525 - -
Lele08g2719 548 SUPERFAMILY WRKY DNA-binding domain 261 322 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele08g2719 548 MobiDBLite consensus disorder prediction 335 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2719 Lele-ChrLele08 32661480 32665594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2719 45 545 WRKY Transcription Factor Family AT2G03340 50.962 3.25e-137 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele08g2719 WRKY 7.7e-25 CL0274