Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2711 ATGGGGTTGAGATCTACAAAGGAGGGGACACCCAAAATTGAAAACCTGAGTTTATATAGCCACTTGATCAATTACCTCACAAAAAATTTATATATTCGCAATTTGGTATCCAAGAAACGGCGGAGAATGCTCATTGCTGGGTATGATCTTGACATGTCATATATCACTGATCGATTGCTAGCAATGTCATTTCCTGCAGAACGTATGCGAGCAATGTATAGAAATCCTCTCTGGCAGGTCAAATCTGTGCTGGATATGAGACATTATGATCACTATAAGATATATAATCTATGTATAGAAGAGAATTATGATCCAGCACACTTTTATGGTCGTGTGGAAGCATATCCCTTTGATGACAACCGTGTACCACCTCTTGAAATGATCAAGAACTTCTGTGAAAGTGTGCATTCGTGGTTATCAAGTGACCCAAAAAATATTGCTGTCATTCATTGCATGGCAGGGAAGGGTAGAACTGGCTTGATGGTATCTTCATACCTAGTTTATAGCGGCATGTCGACAGATGAGGCTCTTCAATTGTATGCTGATAGACGGACAACCAATAACGAAGGAGTATCGATACCAAGCCAACGTCGTTATGTAGGGTACTGGGAAAGTATGCTATCTGTTCCTAGAGGCATCAGTAACGAACCAATAAATGTGAGCTTGCCTCGACCATGTAGCAGAGAATTGCAGCGAATCCGGCTTTATGATACGCTGAATGTTGAAGCGATCTTCTTTGTGATCTTAGAGATGCAGGAGGTTCCCAATCAAGTCTACTGTCCGTCGGTGGAGATTATAAGGAGCAGTTGCAGACAAATTAAGAAAGGATATCAGCAAACCTACAGTCCTCGCTATTATCTCTCTTATGTTGAAGGTGATGAAGATGGACAAGAATCAAAATTAGAGGAACCTCATGTTGTAGTTCAAATGGATACCGAGGATCCGGCGATCTACCAAAAATCTTGTCTGGATCATTATTTTGACAAACCAGTCCAACTTACTGGAGATGTTCGTGTCATATTCTACCAAAAAATGATGGGAAGCCGACTTTTCTACTGCTGTTTTAATACAGCTTTTATTAGGAATGGCTTGCTACAGCTGAAGATGAAAGACTTGGACAAAGTAGGGAGTAGAGGAAGATCAATCTGTGGGCCATCGTTTTGCTTAGAGCTTCTGTTTGGCCCTGCCAACATGAAACACTCGGCAACTCCATCAAATGATGAAGATTCTGGGGATGAATATCCTTAA 1248 0.4119 MGLRSTKEGTPKIENLSLYSHLINYLTKNLYIRNLVSKKRRRMLIAGYDLDMSYITDRLLAMSFPAERMRAMYRNPLWQVKSVLDMRHYDHYKIYNLCIEENYDPAHFYGRVEAYPFDDNRVPPLEMIKNFCESVHSWLSSDPKNIAVIHCMAGKGRTGLMVSSYLVYSGMSTDEALQLYADRRTTNNEGVSIPSQRRYVGYWESMLSVPRGISNEPINVSLPRPCSRELQRIRLYDTLNVEAIFFVILEMQEVPNQVYCPSVEIIRSSCRQIKKGYQQTYSPRYYLSYVEGDEDGQESKLEEPHVVVQMDTEDPAIYQKSCLDHYFDKPVQLTGDVRVIFYQKMMGSRLFYCCFNTAFIRNGLLQLKMKDLDKVGSRGRSICGPSFCLELLFGPANMKHSATPSNDEDSGDEYP 415
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2711 415 SMART PTEN_C2_2 239 395 IPR014020 -
Lele08g2711 415 CDD PTP_PTEN 51 204 IPR045101 GO:0016791
Lele08g2711 415 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN 28 210 - -
Lele08g2711 415 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 207 IPR029021 -
Lele08g2711 415 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311|GO:0016791
Lele08g2711 415 Gene3D Protein tyrosine phosphatase superfamily 28 209 IPR029021 -
Lele08g2711 415 ProSiteProfiles C2 tensin-type domain profile. 241 396 IPR014020 -
Lele08g2711 415 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 31 409 - -
Lele08g2711 415 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 302 395 IPR035892 -
Lele08g2711 415 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 129 184 IPR000387 GO:0016311|GO:0016791
Lele08g2711 415 Gene3D - 271 398 - -
Lele08g2711 415 Pfam C2 domain of PTEN tumour-suppressor protein 314 393 IPR014020 -
Lele08g2711 415 ProSiteProfiles Phosphatase tensin-type domain profile. 41 210 IPR029023 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele08g2711 Lele-ChrLele08 32610574 32614892 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2711 21 408 Protein tyrosine phosphatase (PTP) family AT5G39400 68.974 0.0 565