Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2710 ATGCGATGCGAGTGTACGGCGACAACACATAAAACATCACGAACCTTCCTTCCTGGTTTCCCAAGCTCCTTCATATCCACGTGGATCGGTCGACAGCTCCTGGGAAATAATTCTCAAAGCACCGGCGGCGACGCCGTAGATAACAACTTCATCGAGTGCTACGCTTGCACTCAGGTCGGCGTTCCCTTCTTCCACTCCACCAGCTGCGATGGCTATAACCAGCTCCAATGGGAGGCCTCCGCCGGTTCTTCCCTGATCCCCATTCAGAACCGAACAGCCCGCAGCTGCCCGACGATCAGGCCCAAATCGGGTCCGTTCGGGAAAGTTCTCGACCCGCGAAGCAAGAGCGTGCAGTCATGGAACAGAGCGTTTCTGTTATCGCGTGGGATGGCTCTGGCCATCGACCCGTTGTTCTTCTACGCGCTGTCTATCGGCAGGGAAGGGAGGCCGTGTCTGTACATGGATGAGCGAATGGCGGCAACGGTGACGGTGCTTCGCACGTGCGTGGACGCGATGCACGTGTTCCACGTATGGCTTCAGTTGCGGATGGCTTACGTGTCGAAGGAGTCGACGGTGGTTGGGTGCGGGAAGCTTGTGTGGGATGCACGTGCCATAGCGGCGCATTACCTGGGTTCATTCAGGCGGTTCTGGTTCGACGCGTTCGTCATCTTCCCCATTCCGCAGGCTGTGTTTTGGTTAGTACTGCCCAAATTAATAAGAGAGGAGCGAATCAAACTCATAATGACGATACTGCTATTAATCTTCCTGTTCCAGTTTCTGCCCAAGGTGTACCACAGCATCATCTTGATGAGAAGAATGAAAAAAGTTACCGGCTACATCTTTGGTACCATTTGGTGGGGATTTGGTCTCAATCTCATAGCTTACTTAATTGCTTCTCATGTTACTGGAGGGTGTTGGTATGTGCTGGCAATTCAACGTATTGCATCATGCCTGCAGAAGCAGTGTGAAAGTAGTCCTGGTTGTAATCTGTCTCTTTCATGCTCAGAGCAGGTATGCTACCAGTATCTGTTGCGAAAAAGCACACTAGAAAATCATCCATGTGCTGGAAACTCCACAGTTGTGAGAAAGACTTCGTGCTTCGATCTCGAAGGGCCTTTCAATTATGGCATCTACCAGTGGGCTCTTCCAGTCATATCCAGCAATTCCTTGGCTGTCAAGATTCTATATCCCATATTTTGGGGTTTGATGACCCTCAGCACCTTTGGCAACGTTCTTGAACCCACAAGTCACTGGCTAGAAGTAATTTTCAGCATATGCATTGTACTAAGTGGATTACTGCTTTTCACTTTGTTGATTGGGAACATCCAGGTATTCCTACATGCAGTAATGGCAAAGAAGAGAAAGATGCAGCTGAGATGTCGTGACATGGAGTGGTGGATGAGGAGGAGGCAGCTGCCATCCCATTTAAGACACAGAGTTCGCCATTTTGAGCGTCTCAGATGGGCCGCCATGGGAGGAGAGGACGAAATGGAATTGATCAAGGACTTGCCTGAAGGTCTCAGGAGGGACATCAAGCGCTTTCTATGCTTAGAGCTCATAAAAAAGGTACCTCTGTTTAACAACTTGGATGACCTTATTCTTGACAACATCTGTGACAGGGTTAAACCCTTAATCTTCTCTAAAGATGAAAAGATAATCAGAGAAGGAGACCCAGTGAGAAGGATGGTGTTCATTGTTCGAGGACGAATAAAACGCATCCAAAGCCTAAGCAAAGGCGTGATAGCGACGAGTAACCTTGAAGTAGGAGGCTTTCTGGGGGATGAGCTGCTGTCATGGTGCCTTCGCCGGCCGTTTATAGACCGTCTTCCGGCATCCTCGGCTACATTTGTATGTGTTGAACCAGCAGAAGCATTTGGCCTGAGTGCTGAACACCTTAAGTACATTACCGATAACTTCCGCTACAAATTTGCTAATGAGAGACTCAAGAGAACAGCCAGATATTACTCATCCAATTGGAGAACCTGGGCTGCTGTTAATATCCAACTTGCTTGGCAAAATTACAGGAAAAGGAGTAAAGGTTCAGTGATTTCTGTAACTGATGAAAACGGAGTCACTGAGCGCAGGCTTCTGCAATATGCTGCAATGTTCATGTCAATAAGGCCACATGACCATCTTGAATAA 2142 0.486 MRCECTATTHKTSRTFLPGFPSSFISTWIGRQLLGNNSQSTGGDAVDNNFIECYACTQVGVPFFHSTSCDGYNQLQWEASAGSSLIPIQNRTARSCPTIRPKSGPFGKVLDPRSKSVQSWNRAFLLSRGMALAIDPLFFYALSIGREGRPCLYMDERMAATVTVLRTCVDAMHVFHVWLQLRMAYVSKESTVVGCGKLVWDARAIAAHYLGSFRRFWFDAFVIFPIPQAVFWLVLPKLIREERIKLIMTILLLIFLFQFLPKVYHSIILMRRMKKVTGYIFGTIWWGFGLNLIAYLIASHVTGGCWYVLAIQRIASCLQKQCESSPGCNLSLSCSEQVCYQYLLRKSTLENHPCAGNSTVVRKTSCFDLEGPFNYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNVLEPTSHWLEVIFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSHLRHRVRHFERLRWAAMGGEDEMELIKDLPEGLRRDIKRFLCLELIKKVPLFNNLDDLILDNICDRVKPLIFSKDEKIIREGDPVRRMVFIVRGRIKRIQSLSKGVIATSNLEVGGFLGDELLSWCLRRPFIDRLPASSATFVCVEPAEAFGLSAEHLKYITDNFRYKFANERLKRTARYYSSNWRTWAAVNIQLAWQNYRKRSKGSVISVTDENGVTERRLLQYAAMFMSIRPHDHLE 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2710 713 SUPERFAMILY cAMP-binding domain-like 452 639 IPR018490 -
Lele08g2710 713 Pfam Ion transport protein 119 443 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele08g2710 713 SMART cnmp_10 525 651 IPR000595 -
Lele08g2710 713 Gene3D Jelly Rolls 523 641 IPR014710 -
Lele08g2710 713 Gene3D Helix hairpin bin 451 516 - -
Lele08g2710 713 ProSiteProfiles cAMP/cGMP binding motif profile. 525 604 IPR000595 -
Lele08g2710 713 CDD CAP_ED 525 632 IPR000595 -
Lele08g2710 713 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 106 682 - -
Lele08g2710 713 Gene3D - 149 448 - -
Lele08g2710 713 SUPERFAMILY Voltage-gated potassium channels 112 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2710 Lele-ChrLele08 32601019 32607819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2710 51 713 Ion Channels AT5G15410 75.259 0.0 985