Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2706 ATGGCATTCCTTCACAAGTGGTTCGGATGCCCTGCTTCAACTTCTCGGAAACAACCTTCCACAACATTAGATTATCTATGCCGTCGCTTTTCTCTTGCGCAGATTCGAAAATGGACCGACGACTTTGACGAAAGCCGGGAGATCGGCGAAGGGCGCTATAGTGTGGTGTACAGGGCTTGCATCTCCATCAATGGCGATCTGAAAGATATTGCATTGAAGCGGCTCCGACAACGTGCAACGATTGCCGGCCTCTCGGAGCATAGGAACGAAATCATATTTTCATGCCAGCTACACCACCCTAATCTGGCTTCTCTGGTTGGATTTTGCTATGAAAAAAATGAAACGATTGCGATCTATGACTACGCCCCTAACGGAACACTCTTTCATCAACTTAGGAGCAACTCACCAACACTCTCATGGAAGAAGAGGCTACAAATCAGTATAGGGGTGGCGCGTGGATTACACTACCTTCACTCAGGGACTAAACGCACCGTCATTCATCGCGATATTAAACCGTCTAACATTCTTTTGGACGAGAATTGGGTCGCCAAAGTGACATATTTCGGGATAGCGGTAAAAGGACCAAAGTTTTCAGAAAAGAACGAGAAGCCCAAAGAGGTGGAAATTGCAGGTACTGTACTCTACATAGCTCCTGAGTGCCTTAAGGACCTTGCTATCACGTATAAATGTGATGTGCATTCTTTTGGAGTAGTCTTGTTAGACTTAATTTGCGGAGACACTGCATCCAAGATTTTATTTGAGCGTGAGGCTAGAAATGTTAAGGAATTATAAAATACTTGTGTCCCTGAAATGAGATTGAGTGGAGTGTGGAGGGTTCTCATTAAATACGAGCCGTCGTTACTAGGAATGGCAATCCTTCTCAAGTGCTTTGGAGGCTCTGCTTCAACTTCTCGGAAACAGCTTTCCACAACAATCGAAGATCTATGTCATCGCTTTTCTCTCGCGCAACCTCGAAAATCGACCGATAACTTTGACCAAAGCCGGATTGTCGGTGAAGGGCCCTATGGTATGGCGTACAGGGCTCGCATCTCCGTCAATGGCCAACTGAAAGATATTACAGCGAAGCGTCTCCGACGAGAAGCAGCGACCTCCGCAAACGGGTTCTCACTGTATAAGAACGATATCATATTCATGTGCCAGCTACACCACCAAATCTGGTGACCAAAGTTCTCTGCAAATGATACGAAAGCCATACAGTTGGAATACGTTGAAGGCCCTTGGGGACACATCGCTCCTGAGTGCTTTCGTGCCCCTAATGTTACGTATAAATGTGACGTCTATTCTTTTGAAGTGGTGTTGTTAGAACTAATTTGCGGAAAGACACTATCCCAAATTAGTCAACATAAAGGGCGTCATATTGAGATGCATGTTATTCCATTTACTTTCAGTATAGTTAAGGAAGTACGTAATCTGGCAGAAACAGGAAATGCTGACGGAATTATTGATGAGAGTTTGATGGGAGAAATAGCAGCAGAGTGTTGGAAATTGTACATGGACATAACAGAGAGCTGCTTGAGTGAAGATCCCAATGAGAGGCCTGACATGGGAGAAGTTGAAGGGCAACTAGAACGTCTATTGAAACTACAAAAAGAAGCAGACACCGACCATGGTTTTCATGCTTTCTTGATTTGA 1653 0.4477 MAFLHKWFGCPASTSRKQPSTTLDYLCRRFSLAQIRKWTDDFDESREIGEGRYSVVYRACISINGDLKDIALKRLRQRATIAGLSEHRNEIIFSCQLHHPNLASLVGFCYEKNETIAIYDYAPNGTLFHQLRSNSPTLSWKKRLQISIGVARGLHYLHSGTKRTVIHRDIKPSNILLDENWVAKVTYFGIAVKGPKFSEKNEKPKEVEIAGTVLYIAPECLKDLAITYKCDVHSFGVVLLDLICGDTASKILFEREARNVKELXNTCVPEMRLSGVWRVLIKYEPSLLGMAILLKCFGGSASTSRKQLSTTIEDLCHRFSLAQPRKSTDNFDQSRIVGEGPYGMAYRARISVNGQLKDITAKRLRREAATSANGFSLYKNDIIFMCQLHHQIWXPKFSANDTKAIQLEYVEGPWGHIAPECFRAPNVTYKCDVYSFEVVLLELICGKTLSQISQHKGRHIEMHVIPFTFSIVKEVRNLAETGNADGIIDESLMGEIAAECWKLYMDITESCLSEDPNERPDMGEVEGQLERLLKLQKEADTDHGFHAFLI 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2706 550 Gene3D Phosphorylase Kinase; domain 1 13 121 - -
Lele08g2706 550 Gene3D Transferase(Phosphotransferase) domain 1 122 320 - -
Lele08g2706 550 ProSiteProfiles Protein kinase domain profile. 42 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g2706 550 Pfam Protein tyrosine and serine/threonine kinase 45 248 IPR001245 GO:0004672|GO:0006468
Lele08g2706 550 Pfam Protein tyrosine and serine/threonine kinase 409 528 IPR001245 GO:0004672|GO:0006468
Lele08g2706 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Lele08g2706 550 ProSitePatterns Protein kinases ATP-binding region signature. 48 73 IPR017441 GO:0005524
Lele08g2706 550 Gene3D Phosphorylase Kinase; domain 1 321 392 - -
Lele08g2706 550 SMART serkin_6 42 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g2706 550 FunFam Os07g0541700 protein 123 212 - -
Lele08g2706 550 SUPERFAMILY Protein kinase-like (PK-like) 323 534 IPR011009 -
Lele08g2706 550 Gene3D Transferase(Phosphotransferase) domain 1 393 546 - -
Lele08g2706 550 SUPERFAMILY Protein kinase-like (PK-like) 33 247 IPR011009 -
Lele08g2706 550 PANTHER OS07G0166700 PROTEIN 406 536 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2706 Lele-ChrLele08 32569561 32574959 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2706 410 540 Receptor kinase-like Gene Family AT3G51550 33.588 2.27e-14 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele08g2706 PK_Tyr_Ser-Thr 2.3e-37 CL0016