Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2705 ATGACTTCGACGAAAGCCGGATTATCGGCGAAGGGCTCCATGGTATGGTGTACAGGGCTCAACGGCAAACTCAAAGATATTGCAGTGAAGCGGCTCCGACAACCTGCAACGATTTACGGGCTCTCAGAGTATAAGAACGATATCATATTCATGTGCCAGCTACGCCACCCGAATCTGGTGTCTCTTGCTGGATTTTGCGATGATAAGAATGAAATGATTGTGGTCTATGATTACGCCCCAAATGGATCATTGTATCATCATCTTTACGGGATAGGGAGCAAGTCGCCAAGACTCTCGTGGAAGAAAAGGATAGAAATCAGCATAGGGGTGGCGCGTGGGTTACACTACCTTCACTCTGGAACCAAACGCACCATCATTCATCGGAATATTACACCGGCTAACATCCTTTTAGACGAGAAGTGGGTTCCGAAACTCTCATTTTTCGGGCTCTCTATAAAAGAACCAAAGTTTTCAGAAAAGGATGTGAAAGCCAAAGAGTTGGAATCCGTTGAAGGCACCTGGGGTTCTCCAAATGCGACGCATAAAAGTGACATCTATTCATTTGGAGTAGTTTTGTTGGAACTAATTTGCGGGAAGACTCCATCCCAAATTATGAGTCGTCACGGGTTTCATATTAAGGAAGCACGTAATTGGGCAGAAACAGGAAAAGCTGAGGAAATTATTGATGAGAGATTGGTGGGAGAAATAGCACATGAGTGTTGGGAATTGTATATGGACATTGCAGGGAGTGGCTTGAGTCTAGAGCCCAATGAGAGGCCTCATATGGGAGATGTTGAGGTTCAACTTGAACGTCTCTTGCAACTACAAGAGGAAGCAGATACCAATCAGGCTTCTCATGCTTTCTTGATTTGA 873 0.449 MTSTKAGLSAKGSMVWCTGLNGKLKDIAVKRLRQPATIYGLSEYKNDIIFMCQLRHPNLVSLAGFCDDKNEMIVVYDYAPNGSLYHHLYGIGSKSPRLSWKKRIEISIGVARGLHYLHSGTKRTIIHRNITPANILLDEKWVPKLSFFGLSIKEPKFSEKDVKAKELESVEGTWGSPNATHKSDIYSFGVVLLELICGKTPSQIMSRHGFHIKEARNWAETGKAEEIIDERLVGEIAHECWELYMDIAGSGLSLEPNERPHMGDVEVQLERLLQLQEEADTNQASHAFLI 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2705 290 SUPERFAMILY Protein kinase-like (PK-like) 23 275 IPR011009 -
Lele08g2705 290 Pfam Protein tyrosine and serine/threonine kinase 23 261 IPR001245 GO:0004672|GO:0006468
Lele08g2705 290 Gene3D Transferase(Phosphotransferase) domain 1 81 288 - -
Lele08g2705 290 Gene3D Phosphorylase Kinase; domain 1 15 80 - -
Lele08g2705 290 ProSiteProfiles Protein kinase domain profile. 1 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g2705 290 PANTHER OS07G0166700 PROTEIN 22 276 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2705 Lele-ChrLele08 32565141 32566013 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2705 22 276 Receptor kinase-like Gene Family AT2G39360 42.963 2.40e-60 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele08g2705 PK_Tyr_Ser-Thr 8.5e-33 CL0016