Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2703 ATGGGAATCCTTAACAAGTGCTTTGGAGGTTGTGGTTCAACTCCTCCGAAAAAGCCTTCCACAACAATGGAATATCTATGCCGTCGCTTTTCTCTTGCTCAACTTCGAAAATCCACCGACGGCTTCCACAAAAGCCGGAAGTTCGGTGAAGGGCCGTATGGTGTGTCTTACAGGGCTCGCATCTCCGTCAACGGCGAACTGAAAGATATTACAGTGAAGCGGCTCCGACGAGAAGCGGCGATTTCCTCAAACGGGATCTCACTGTATAAGAAGGATATCATATTTATGTGTCAAATAAACCACCCGAATTTGGTATCCTTTATTGGATTTTGTGAAGATAAGAAAGAAATGATTGTGGTGTATGACCACATCCAAAATGGATCTCTCTACGATGAAATTCTTGCAAGGGATAGCAACTCGCGGACATTCTCGTGGAAGAAGAGGCTAGAGATCAGTATAGGGGTGGCGCGTGGATTGCACTACATTCACTCAGGGACCAAACGCACCAGCATTCATCGCAATATAACACCGTTTACCATTCTTTTGGACGAGAATTGGGTTCCCAAACTCATGTTTTTCGGGCTCTCTTTGAAAGGACCAAAGTTTTCAGCAAAGGATATGAAGCCCAAAGTGTTGTAA 639 0.4491 MGILNKCFGGCGSTPPKKPSTTMEYLCRRFSLAQLRKSTDGFHKSRKFGEGPYGVSYRARISVNGELKDITVKRLRREAAISSNGISLYKKDIIFMCQINHPNLVSFIGFCEDKKEMIVVYDHIQNGSLYDEILARDSNSRTFSWKKRLEISIGVARGLHYIHSGTKRTSIHRNITPFTILLDENWVPKLMFFGLSLKGPKFSAKDMKPKVL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2703 212 Pfam Protein tyrosine and serine/threonine kinase 44 198 IPR001245 GO:0004672|GO:0006468
Lele08g2703 212 ProSiteProfiles Protein kinase domain profile. 42 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g2703 212 SUPERFAMILY Protein kinase-like (PK-like) 33 198 IPR011009 -
Lele08g2703 212 Gene3D Phosphorylase Kinase; domain 1 13 123 - -
Lele08g2703 212 Gene3D Transferase(Phosphotransferase) domain 1 124 209 - -
Lele08g2703 212 PANTHER OS07G0166700 PROTEIN 27 200 IPR045272 GO:0004714|GO:0006468
Lele08g2703 212 SMART tyrkin_6 42 212 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2703 Lele-ChrLele08 32556720 32557358 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2703 10 205 Receptor kinase-like Gene Family AT5G38990 41.117 1.23e-42 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele08g2703 PK_Tyr_Ser-Thr 1.3e-20 CL0016