Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2702 ATGGCATTCCTTAAGAAGTGCTTTGGAGGCTGTTTACCAACTTCTAATAGTAAGAAACAACCTTCCACATCAATAGATTATCTATGCCATCGCTTTGCTCTTTCCCAACTCCGAAAATCCACCGGCGACTTTGGCCAAAGCCACACTATAGGTAAAGGCCGCCATGGTTTGGCCTACAGGGCTTCCATCCCCGTCAATGGCCAACGGAAAGATGTTGCAGTGAAGAGGCTCGGACAACAATCCTCGACTTCTTCTGACGGACTCTCACTGTATAAGAACGAAATCATATTCATGTGCCAGCTAAACCACCCAAATCTGATGTCTCTTGTTGGTTTCTGCGATGACAAAAATGAAATGATTGCTGTCTATGAGTACGCGCCGAACAAATCACTCCGTCATCAACTTTACGAAGGAGAGACCAACTCGCCGATACAGCCATGGAAGAAGAGGCTAGGAATCAGCATCGGGGTGGCGCGTGGATTACACTACCTTCACTCAGGGACCAAACGCATCATCATTCATCGCCATGTAACGCCCGCCTCGATTCTTTTGGGCGAGAATTGGGTTCCCAAACTCTCTTATTTCGGGTTCTCTCTAAGAGGACCAAAGTTTTCGGCAAAGGATGCGAAACCCATACAGTTAGAATCCGTTAAGGGACCCAAGGGATACATGGCTCCTGAGTGCTTGCTTGCCACTAATGTCACTTATAAGAGTGACGTCTATTCTTTTGGAGTAATTTTGTTGGAACTAATTTGCGGGAAGACTCTGTCCCAAATTAGTGAGCATGAGGGGCATCAGATTGAGAATGCAAACGCTTTTTCATTTACAGTTAGTGCAGTTAAGAAAGTAAGAGATTTGGCAGAAAGAGGAAATGCTAAGGAAGTTATTGATGAGCGTTTGGAGGGAGACATAGCAAAAGAGTGTTGGAAACTGTACATGGACATTATAGAGAGTTGCTTGAGCGAAGATCCCAGTGAGAGGCCCGATATGGGAGAAGTTGAAGTTCAACTTGAACATATATTGCAATTACAAGAGGAAGCAGATTCCAACCATGGTGTTCATGCTTTCTTGATTTGA 1077 0.4485 MAFLKKCFGGCLPTSNSKKQPSTSIDYLCHRFALSQLRKSTGDFGQSHTIGKGRHGLAYRASIPVNGQRKDVAVKRLGQQSSTSSDGLSLYKNEIIFMCQLNHPNLMSLVGFCDDKNEMIAVYEYAPNKSLRHQLYEGETNSPIQPWKKRLGISIGVARGLHYLHSGTKRIIIHRHVTPASILLGENWVPKLSYFGFSLRGPKFSAKDAKPIQLESVKGPKGYMAPECLLATNVTYKSDVYSFGVILLELICGKTLSQISEHEGHQIENANAFSFTVSAVKKVRDLAERGNAKEVIDERLEGDIAKECWKLYMDIIESCLSEDPSERPDMGEVEVQLEHILQLQEEADSNHGVHAFLI 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2702 358 ProSitePatterns Protein kinases ATP-binding region signature. 50 75 IPR017441 GO:0005524
Lele08g2702 358 SUPERFAMILY Protein kinase-like (PK-like) 35 343 IPR011009 -
Lele08g2702 358 Gene3D Phosphorylase Kinase; domain 1 12 125 - -
Lele08g2702 358 Gene3D Transferase(Phosphotransferase) domain 1 127 355 - -
Lele08g2702 358 ProSiteProfiles Protein kinase domain profile. 44 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g2702 358 PIRSF ILK 11 352 - -
Lele08g2702 358 Pfam Protein tyrosine and serine/threonine kinase 47 336 IPR001245 GO:0004672|GO:0006468
Lele08g2702 358 PANTHER OS07G0166700 PROTEIN 29 344 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2702 Lele-ChrLele08 32552997 32554073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2702 30 344 Receptor kinase-like Gene Family AT2G39360 39.048 2.00e-63 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele08g2702 PK_Tyr_Ser-Thr 1e-37 CL0016