Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2692 ATGCTGCTTTCCGAGGCCGCCGCCTCCACCGACCGTGTCTTCGTCTGCAAGACCTGTAACCGCCAGTTCTCGTCCTTCCAGGCGCTCGGCGGCCACCGTGCCAGCCACAAGAAGCCCCGGACGATGACGGCCGGTGAGGAAAGTAACAGCAACAGCGACGATTCGTCGTCACCGGCTAAGCCTAAAACTCATGAGTGCTCAATCTGTGGATTGGAGTTTGCCATAGGTCAGGCTTTGGGGGGTCACATGAGGAGACACAGAGCTCCAACATCTCATAATAATAACAGTAACAGCTTGTCATCATCAAGCGTAGAGTTTGATTCAGATGCAACGAAGAAGAAGAAGAAGAAGAAGAGCAAAAGGGTTCTGTTTCTGGACTTGAACTTGACGCCGCTTGAGAACGATTTGGAGATCTTAGGGATAGGAACCTCTACTCCGTTTCTAGTTACACTTTAA 456 0.511 MLLSEAAASTDRVFVCKTCNRQFSSFQALGGHRASHKKPRTMTAGEESNSNSDDSSSPAKPKTHECSICGLEFAIGQALGGHMRRHRAPTSHNNNSNSLSSSSVEFDSDATKKKKKKKSKRVLFLDLNLTPLENDLEILGIGTSTPFLVTL 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2692 151 MobiDBLite consensus disorder prediction 90 106 - -
Lele08g2692 151 MobiDBLite consensus disorder prediction 28 64 - -
Lele08g2692 151 ProSitePatterns Zinc finger C2H2 type domain signature. 66 86 IPR013087 -
Lele08g2692 151 ProSitePatterns Zinc finger C2H2 type domain signature. 16 36 IPR013087 -
Lele08g2692 151 SMART c2h2final6 64 86 IPR013087 -
Lele08g2692 151 SMART c2h2final6 14 36 IPR013087 -
Lele08g2692 151 Pfam C2H2-type zinc finger 13 39 - -
Lele08g2692 151 Pfam C2H2-type zinc finger 64 89 - -
Lele08g2692 151 Gene3D Classic Zinc Finger 59 123 - -
Lele08g2692 151 Gene3D Classic Zinc Finger 1 58 - -
Lele08g2692 151 ProSiteProfiles Zinc finger C2H2 type domain profile. 64 91 IPR013087 -
Lele08g2692 151 PANTHER ZINC FINGER PROTEIN ZAT5 7 134 - -
Lele08g2692 151 ProSiteProfiles Zinc finger C2H2 type domain profile. 14 41 IPR013087 -
Lele08g2692 151 SUPERFAMILY beta-beta-alpha zinc fingers 12 86 IPR036236 -
Lele08g2692 151 MobiDBLite consensus disorder prediction 80 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2692 Lele-ChrLele08 32497526 32497981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2692 1 142 C2H2 Transcription Factor Family AT2G28710 47.917 3.09e-33 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele08g2692 zf-C2H2_6 4.6e-10 CL0361