Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2677 ATGAAAACGAAAGCGACGGCGAAAATTGAGAAGAAAGCAACTCCAAATCGATCCCAAGGGACTAATTGCTTTACCTATGGAAGTGGAGGTGAAGCTCCTTCTCCCAGATTCAGCTTCTCACCAGAAACTCTCCGATCTACTCGCACCATTTCACATCAGCACCTTAATTCAAGAAAACATCTTCTTCGACGCCGCATTGAGGAGCAGGAAGAGCCATTCGACACCGCAGTCGGTCGCGCCTGCGTAGTAGAGCCAGGGAGGCTCGCAAGAACCGGGTCGTCGGAGATACTCAAGAGAGTGGGGGATGATTATGGAATCGGGGAAAAAGGGAATTTTGTGTGCTTAGGTGGATTTAGGAATGTGAGAGGGCATTCATTTTGGAACGAGGAGCCGTCAGTGCTGCTGCAACGCTCGGTAACACCCATACCGATGGCGAGGATCAAGGTTCACGAACTCAGGCAGAAAACGAAGGCCGAATTGCTGAACCAACTCAAGGATCTGAAAGCCGAGCTTGCTTTGCTCCGTGTCGCTAAAGTCACCGGTGGTGCTCCCAACAAGCTCTCCAAGATAAAGGTGGTGAGATTGTCCATTGCCCAAGTGTTGACGGTGATTTCTCAGAAGCAGAAGGCTGCATTGAGGGAAGCATATAAGAACAAGAAGTACTTGCCTCTTGATCTGCGCCCAAAGAAGACCAGGGCTATTCGCAGACGGCTTACCAAGCACCAGGCTTCACTGAAAACTGAACGACAGAAGAAGAAGGAGACATACTTTCCATTGAGGAAATATGCCATTAAGGTGTAG 801 0.4944 MKTKATAKIEKKATPNRSQGTNCFTYGSGGEAPSPRFSFSPETLRSTRTISHQHLNSRKHLLRRRIEEQEEPFDTAVGRACVVEPGRLARTGSSEILKRVGDDYGIGEKGNFVCLGGFRNVRGHSFWNEEPSVLLQRSVTPIPMARIKVHELRQKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKETYFPLRKYAIKV 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2677 266 Coils Coil 150 177 - -
Lele08g2677 266 Hamap 50S ribosomal protein L29 [rpmC]. 147 207 IPR001854 GO:0003735|GO:0005840|GO:0006412
Lele08g2677 266 PANTHER 60S RIBOSOMAL PROTEIN L35 144 266 IPR045059 GO:0000463|GO:0022625
Lele08g2677 266 SUPERFAMILY Ribosomal protein L29 (L29p) 147 208 IPR036049 GO:0003735|GO:0005840|GO:0006412
Lele08g2677 266 MobiDBLite consensus disorder prediction 1 37 - -
Lele08g2677 266 MobiDBLite consensus disorder prediction 12 28 - -
Lele08g2677 266 FunFam 60S ribosomal protein L35 221 266 - -
Lele08g2677 266 Gene3D - 221 266 - -
Lele08g2677 266 TIGRFAM L29: ribosomal protein uL29 151 207 IPR001854 GO:0003735|GO:0005840|GO:0006412
Lele08g2677 266 CDD Ribosomal_L29_HIP 151 207 - -
Lele08g2677 266 Gene3D - 144 220 IPR036049 GO:0003735|GO:0005840|GO:0006412
Lele08g2677 266 FunFam 60S ribosomal protein L35 144 220 - -
Lele08g2677 266 Pfam Ribosomal L29 protein 151 207 IPR001854 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2677 Lele-ChrLele08 32397178 32403972 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2677 144 266 Cytoplasmic Ribosomal Protein Gene Family AT3G09500 89.431 2.25e-71 213