Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2665 ATGAGCACCAACACATCACAGGCGCCTGGCTCTAAGCCGTCGTTTAGCGGATACGCCTATTACACCATCGGACTATCCACCGGAATTCTCCTTCTCTTCGCTTTCATCGCCGTAATCTTGTACTTGTGCTCTCGCAGAATCGCCATGAATCCGACGCAACTGTCACGAGTTCGCAACGTAAGCTTTGGCTTACACACCATTAGCATCGGAGATGCTCCGGGGACGAACAGTCCACAGTTAGGTGTGGATGAAGCGACCTTGAAGAGTTATCCAGTGCTGTTATACTCAGAAGTGAATCGTGATCGGAAAGGCGGCGCTGGCGGTGGTGGGGATTCTGCGGAGGCTACTTGTTCGATATGCTTGGGGGATTTCAGTGACAGTGAGTGGTTGAGGGAGTTGCCGGATTGTGGTCACTTGTTTCACCAGAAGTGTATTGATATGTGGCTGAGGATGAACTCATCATGTCCGTTGTGTCGGACCTCGCCGCTTCCGACGCCGGTTTCAACTCCACTTGCTGAAGTTACTCCCTTGGCAAGATCTGGGGCTTGA 549 0.5209 MSTNTSQAPGSKPSFSGYAYYTIGLSTGILLLFAFIAVILYLCSRRIAMNPTQLSRVRNVSFGLHTISIGDAPGTNSPQLGVDEATLKSYPVLLYSEVNRDRKGGAGGGGDSAEATCSICLGDFSDSEWLRELPDCGHLFHQKCIDMWLRMNSSCPLCRTSPLPTPVSTPLAEVTPLARSGA 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2665 182 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 12 173 IPR045899 -
Lele08g2665 182 SMART ring_2 117 158 IPR001841 -
Lele08g2665 182 ProSiteProfiles Zinc finger RING-type profile. 117 159 IPR001841 -
Lele08g2665 182 SUPERFAMILY RING/U-box 116 165 - -
Lele08g2665 182 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 163 IPR013083 -
Lele08g2665 182 CDD RING-H2_PA-TM-RING 116 159 - -
Lele08g2665 182 Pfam Ring finger domain 116 159 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2665 Lele-ChrLele08 32280875 32281423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2665 21 182 C3H Transcription Factor Family AT2G35910 46.626 5.63e-38 128