Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2643 ATGGACACTTCAAATCCTGCAGCATTTGTAAATGCAGATTTGCTTCCCAATTTCATAGGGAAGAAAGTTCGAGCCGTTGTTCAAGTTCATCAATCTGACGGTGGTGTTGCCATTGGAAAATCCACAGATGGCAATCAGCTAACTGTGAAAGGGTTGCCACAGGTTCCTGCTATGAATTATGTTGAGGTGATTGGTATTGCAGAGAGTAACCAATTGATTAATGCTGAGATATGGACTGACTTTGGCAACACATTTGACACTCAATCGTATAATAAATTATGCCAACTAGCAAATGGGGAATTCAGAAGTCTGTTTCTGTAG 321 0.405 MDTSNPAAFVNADLLPNFIGKKVRAVVQVHQSDGGVAIGKSTDGNQLTVKGLPQVPAMNYVEVIGIAESNQLINAEIWTDFGNTFDTQSYNKLCQLANGEFRSLFL 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2643 106 SUPERFAMILY Nucleic acid-binding proteins 5 105 IPR012340 -
Lele08g2643 106 CDD RPA3 6 105 - -
Lele08g2643 106 Pfam Replication factor A protein 3 1 99 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Lele08g2643 106 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 106 - -
Lele08g2643 106 Gene3D - 1 106 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2643 Lele-ChrLele08 32097126 32098193 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2643 1 106 Core DNA Replication Machinery Family AT4G18590 64.151 6.50e-48 147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g2700 06 34814856 34819282 Lele08g2643 08 32097126 32098193 hybridization