Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2641 ATGGGTGTGGGTATCTCTGTTCTGATAGGGTTGAAAGCTACTTTACTATTTCTGAGTTTTGTATACCTTAGAAGCCTAGGTTTCATGCTGTTGACTATTCCTTTCCTCTATGCCTCTTTGGTATCATTTTTGCTATCGATTGCTTCTCACCCATCAATCAATCTTCCAATGCTTTTGGGGAAGAACACAGATGGGAGCTTCCCCATTTGGGCATTAATCATGTTCAGCCCATATTTGTACTTTGTTCGACTTTTCTCAACATTGAGGAGAATGAGAAGCCGGGAAGCACCTTACAGTGAAATTTCTGAGGGACTTTATGTTGGTGGGTGGCCTTCTTCACGTGAGAAATTGCCACCAGGAGATCCAGCCATTATTGATTGCACCTGTGAACTGCCTAGAATGTCAGAATTCTCAGGTTTGGCGTATATGTGCATTCCAACTTGGGACACCAGGGCTCCTCAACCTGCTGAAATAGAAACCGCTGTTAGTTGGGCTGTTCGTAAGAGAGACCTCAAAAGGCCCATTTTCATCCACTGTGCATATGGTCATGGAAGAAGTGTTGCCGTTATGTGTGCACTGTTAGTGGCACTAGGTATTGCAGAAGATTGGAAAAATGCCGAAAAGTTGATCAAACAAATCCGGCCTTACATCCGGATGAATGCTCTCCATCGGAAGGCGCTCGAAGAATGGTCAAAGCACCGGTTATCGGCGCCAAAGAAGAAAGGAGGGATGGGTATGAGTTCCTTCAGTCAATCACAGATTGATGGCCTTTAA 774 0.447 MGVGISVLIGLKATLLFLSFVYLRSLGFMLLTIPFLYASLVSFLLSIASHPSINLPMLLGKNTDGSFPIWALIMFSPYLYFVRLFSTLRRMRSREAPYSEISEGLYVGGWPSSREKLPPGDPAIIDCTCELPRMSEFSGLAYMCIPTWDTRAPQPAEIETAVSWAVRKRDLKRPIFIHCAYGHGRSVAVMCALLVALGIAEDWKNAEKLIKQIRPYIRMNALHRKALEEWSKHRLSAPKKKGGMGMSSFSQSQIDGL 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2641 257 MobiDBLite consensus disorder prediction 237 257 - -
Lele08g2641 257 PANTHER - 3 240 - -
Lele08g2641 257 Pfam Dual specificity phosphatase, catalytic domain 123 232 IPR000340 GO:0008138|GO:0016311
Lele08g2641 257 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 80 235 IPR029021 -
Lele08g2641 257 Gene3D Protein tyrosine phosphatase superfamily 98 236 IPR029021 -
Lele08g2641 257 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 156 225 IPR000387 GO:0016311|GO:0016791
Lele08g2641 257 SMART dsp_5 97 233 IPR020422 GO:0006470|GO:0008138
Lele08g2641 257 CDD DSP_bac 94 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2641 Lele-ChrLele08 32088068 32091472 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2641 133 238 Protein tyrosine phosphatase (PTP) family AT5G56610 28.182 2.73e-07 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g2699 06 34808000 34811007 Lele08g2641 08 32088068 32091472 hybridization