Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2605 ATGGAAATGAATGGTGCTTTATCTGATAGCAGCTGTACTCGATTTCAGAAAACTGCTCCGGTGAGGGAATCGTCGTCTCCGGCAGCCGTGGTAGGTGGTAATTCGCGACCCATGAATGTGGTTGACGAGTTTGACCCCTGGAAGGGACAGGCATCTTTCAAGAGCTGGGCCAAGCAAACTGAGGAGAGCTACCAGTTGCAGCAGGCTCTGGCGCTTCGTCTTTCATCGCAGGCTGCTTGTGCAGATGATCCCAATTTCCTGGACTTGGAATCTAGCTCTTCATCCAGTTCGGCCGAGGCAGTGTCTCATCGATTTTGGGTCAATGGTTGTTTGCAATACTCAGACAAAATTCCAGATGGATTTTATCTTATCCATGGGATGGATGCATATACATGGACTATAAGTGCTGATCTGCAGAATGTTGGCCTGATTCCATCATTTGAATCACTGATGTCGGTTGAACCATGTGATGATTTGTCAGTTGTAGTGATTGCAATTGACAAATCAAGAGATCCTGGTTTGAGAGAACTGCTAAATGGCATAATTAGTCTTTCTAATAACTGGATTACTAAAAAGGATGTAATCGATCATCTTGCAAATCTTGTTTGCAGTAGGTTGGGGGGGGAAACCTGGACTGAAGAAAACTTAGCTTCGCGCTGGAAGGAGTGCACTCAAATTCTAAAAGACATCCTTCATTCTGTCATTCTTCCAATTGGAAGCTTAACTTTTGGCTTATGTGTCCACCGAGCATTGCTCTTTAAAGCATTAGCTGACTCAGTGAACCTTCCATGCCGAATTGTCAAGGGTTGCAAGTATTGTAAAAAGGATGTAGGTGCCTCATGTTTAGTGCAAATTGGCCCTGAAAGGGAGTATTTGATTGATTTGGTTGGAAGGCCAGGGGCTATGAGCCAGCCCGATTCTTCGCTTAATTCTGCATCTTCATTATTAATTGCATCACCACTATGTCATCCAAAGTTCAAGCCAGTTGAAACTGCTGAATATTCAAAGACATTAGCCCAATTGTATTTCTTGGACTGTCAAGGACTGCAACTTGTATTTGACTCCAAGTCAGGTGGTGCAATTGATCATAATGATGAAATCGACAGAAGGCCTACTGAAGCTTTTAATGCAAACCATGCAGAAGAGTATGCGTTATTCAGAAACGCAAACCAGTCAGTATTGGATAGTCCGAGTCACCGTGTTGATCTTGATGAGGATGGTCTGGAAATTTTATGGAGTGAACTTATTTTGAAAGATAAAATTGGAACAGGTTCATTTGGAACTGTCCTTCGTGCAGATTGGCGTGGTTGTGACGTTGCTGTGAAAATTCTCAAGGTTCAAGGTTTTGATGCAGAACGATATCATGAATTTAGAAAGGAGGTATCACTCATGAAACGTCTGCGGCATCCAAACATAGTTCTCTTCATGGGTGCAGTTTTTGAACAGCCCAACTTGTCAATAGTGACAGAATATTTATCAAGAGGAAGCTTGTTTGAACTTTTGCGCATGCCAGATGCTAGATCAATTCTCAGTGCGAAGCGTCGATTAAGTATGGCCTATGATGTGGCAAGTGGAATGAATTATCTTCATCAAATGAGATCTCCCATTGTTCATAGAGATCTTAAGTCTCCAAATCTTTTGGTGGACGATACTTATACAGTCAAGGTATGTGATTTTGGTCTCTCACGGACAAAGGCAAACACATTTCTTTCATCTAAAACAGCTGCAGGGACGCCTGAGTGGATGGCACCAGAAGTCATTCGTGGTGAACCATCAAATGAAAAATGTGACATATTCAGCTTCGGTGTAATTCTGTGGGAACTAGTGACCCTGCAACAACCTTGGAGAAACTTAAATCCATCTCAGGTTGTTGCAGCTGTGGGTTTCATGGGCAAAATACTAGAGATTCCGAGCTATGTGAATCCGGAACTGGCGGCGTTGATTCAACTCTGCTGGGCCGTTGAACCCTCGAGCCGCCCCTCTTTCTCCTATATTATGAACTGTCTGCAGCAAATGATTGCCGATTCTCAAGGGTGA 2037 0.4335 MEMNGALSDSSCTRFQKTAPVRESSSPAAVVGGNSRPMNVVDEFDPWKGQASFKSWAKQTEESYQLQQALALRLSSQAACADDPNFLDLESSSSSSSAEAVSHRFWVNGCLQYSDKIPDGFYLIHGMDAYTWTISADLQNVGLIPSFESLMSVEPCDDLSVVVIAIDKSRDPGLRELLNGIISLSNNWITKKDVIDHLANLVCSRLGGETWTEENLASRWKECTQILKDILHSVILPIGSLTFGLCVHRALLFKALADSVNLPCRIVKGCKYCKKDVGASCLVQIGPEREYLIDLVGRPGAMSQPDSSLNSASSLLIASPLCHPKFKPVETAEYSKTLAQLYFLDCQGLQLVFDSKSGGAIDHNDEIDRRPTEAFNANHAEEYALFRNANQSVLDSPSHRVDLDEDGLEILWSELILKDKIGTGSFGTVLRADWRGCDVAVKILKVQGFDAERYHEFRKEVSLMKRLRHPNIVLFMGAVFEQPNLSIVTEYLSRGSLFELLRMPDARSILSAKRRLSMAYDVASGMNYLHQMRSPIVHRDLKSPNLLVDDTYTVKVCDFGLSRTKANTFLSSKTAAGTPEWMAPEVIRGEPSNEKCDIFSFGVILWELVTLQQPWRNLNPSQVVAAVGFMGKILEIPSYVNPELAALIQLCWAVEPSSRPSFSYIMNCLQQMIADSQG 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2605 678 Pfam Ethylene-responsive protein kinase Le-CTR1 98 302 - -
Lele08g2605 678 SUPERFAMILY Protein kinase-like (PK-like) 398 669 IPR011009 -
Lele08g2605 678 ProSiteProfiles Protein kinase domain profile. 415 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g2605 678 Gene3D Transferase(Phosphotransferase) domain 1 494 677 - -
Lele08g2605 678 Gene3D Phosphorylase Kinase; domain 1 408 493 - -
Lele08g2605 678 FunFam Serine/threonine-protein kinase isoform 1 405 493 - -
Lele08g2605 678 Pfam Protein tyrosine and serine/threonine kinase 416 669 IPR001245 GO:0004672|GO:0006468
Lele08g2605 678 FunFam PAS domain-containing protein tyrosine kinase family protein 493 677 - -
Lele08g2605 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 536 548 IPR008271 GO:0004672|GO:0006468
Lele08g2605 678 MobiDBLite consensus disorder prediction 1 34 - -
Lele08g2605 678 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 82 672 - -
Lele08g2605 678 ProSitePatterns Protein kinases ATP-binding region signature. 421 442 IPR017441 GO:0005524
Lele08g2605 678 SMART serkin_6 415 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g2605 678 MobiDBLite consensus disorder prediction 1 32 - -
Lele08g2605 678 CDD STKc_MAP3K-like 421 667 - -
Lele08g2605 678 PRINTS Tyrosine kinase catalytic domain signature 596 618 IPR001245 GO:0004672|GO:0006468
Lele08g2605 678 PRINTS Tyrosine kinase catalytic domain signature 489 502 IPR001245 GO:0004672|GO:0006468
Lele08g2605 678 PRINTS Tyrosine kinase catalytic domain signature 530 548 IPR001245 GO:0004672|GO:0006468
Lele08g2605 678 PRINTS Tyrosine kinase catalytic domain signature 640 662 IPR001245 GO:0004672|GO:0006468
Lele08g2605 678 PRINTS Tyrosine kinase catalytic domain signature 577 587 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2605 Lele-ChrLele08 31790834 31799714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2605 56 673 MAP Kinase Kinase Kinase AT5G03730 58.308 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lele08g2605 PK_Tyr_Ser-Thr 1.3e-66 CL0016