Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2604 ATGATAAACTTGGGAGGAAAACTCTTTACTCTGGAAGAGAAACAAGTTCAGATGAATGGTTCATGGGTCCCTGTCACCCCGGAGAAGCCAGTTCAAATAAGACCTGATACAATATCGGCAGGCTGGCAGGAAAATCGAATGGCAGGAGGGAATTTGAAAATGTTAACTGTTCCTGGAAGTGGCTACATGAAAGAGATGCTGCAGTGTAATGGGTTAGATCAAAATGTCCATCTAGTAGGAGAAACTAAAGAGTACAATTATTTTGATGGAGGTTCTTCGACGAGAGCCAGTGTCAACAATCACATTGATGTGGACTTTGACAACAATAGATTGAATACTTTGGAACTTCTATTCATGCAAAATGCAAGTAACGATGGTTATGCTGACAGGAACTTAAGTGAAAGTATAAGCATGGCAGTAAGAACACCAGTGCTACCAAAATTTCATCCTCACACAAGAAGTAATGGGAGAGATTTCAATGCAGATGGTTTCACTGTCAACGAAAACAGGAACTACGCAGATTCAGAAACAGTGTACACAGATGCAAATCTTTCGGTCCCAAATAGGAATTCTGAATGTGACAGCAGCAACTTATATGATTTTCTGAACAATGACGCTCACTTCTCATTCTCAAGCCTGCTGAATGGTAGCCTATCTGAGCCGGAGATACTCAATGGTGGTTTTTACATACCTTGCAGACCCAAGTATGATCAAAACTCTGCAGATATTACAGAAGCTGATGATGTCTTTAGTTTCACCAACTCCTTCCAATCAGTAATGGGAACAATGGATCAGTTCAATAAGTTTACAGACAACCAGTTTGTGAAGTATGTAACAGCTGAAAGTCAAATTCAGGTGACTGACAGGCCAGACAACTTGGTTGCATCCACAGAAAATGATCACCGTGAATATTGTGATGGACTTCTACAGCATATTGTCGATACATCTACAGCAACTTCTAAATCATACGACCAAAATGAGGGTTGTGAAAATAATCATCGTAGTGGAAATGGCCTGGATATTGATCTGAATAAGACACCTGAGCAGAAACCACCTAAACGAAGAAAGCACAGGCCGAAGGTAGTTGTAGAAAAAAAGTCCAAAAGAACTCCAAATCCTGAAACTAGAAAAAAAGGAGGATCTAGGGAGAATCCATCTCAAAAGAGGAAGTATGTACGAAAGAATGTCCCAAAAGAAGGAGCAACACCGCAAGCTGATGTTTTAGAGACTTCAGGTTCTGCCACTGTAACTAGAAAATCTTGCAGGAAAGCTCTAAATTTTGATTTAGAAGATAATAGATGCAAAGCACAGACTGCAACTAGAAAATCTGGCAGGAAAGCTCTACATTTTGATTTAGAAGAGAATAGATGCAATGACCAGAACAAATCAGTCAATCAGCAGGAGATCCAGGGCAGAAATGGGTTGCTCACAGAGTTGCTGAGCGCAGCGAGTGTATGCTATGATACAAACTCAGCTTTGCTTCACGGCAAGCAGGATGGACTTACAGTTGAAAACAAACAACCCAGAAGCACAGATGACAGTGCCTTTTTATTGCACCAAAAGCTAAGTGACAGATTCCTGCCAAAAGAGCAAGCAAATGGAACCTTGTCAGCAAATACAGAGATGCAGATTAAAAATTTGTTAGAACCTGAGAAAGGTCCAGCGCAAGGCAATGCTGGATTATGCAAGGAAAGAAACAAAGGATGCTTGGAGCTATGTATTTGCGCAGATGGAACTGACAATGTTCTCTTGCAACCAGAGACATGTCTGGAGTTCCCTCAAAGGACCCAAGTACCAATGTCCCAAAATATCCTTCATTTGGTGCCAAACATTTTGAATTGTATTGAAGGAAGCAGTTTGAAGAGAAAATATTGCCATGCTGATGAGAAGCAATATGCCCCTGCCACAAATTCACTTTCTTCTTCCTTATTGCACCAAGAGATTTTCCAAGTGGATGAAAATCGTAATGGCACACCTCTGGATAAATATGTTTTGAAAACTCAGAAAAGGAGGAAAACTCCAGACAAACTTGGTTCGCAAAAAGTAAGAAGAAAAAGCAAAAATAAATCTCAAACACAATTAACTGATGAGAAATCAAGCTGCTACGCTGGTGATAGCCTTGCTAGCTCAGATGCACTACACAAGATATGTCCTACACCAATTGATGAGATCATTTGTCGACTCAAAGATCTCAACCTTGGGGACAGCAATATATCAAGAATGGATGGACAAAGTGCAATTGTCCTATATAACGGAGAAAATTCAGTTGTCCCGTATGAGGGGTTTGACTTTGCAAAAAAACGCAAACCACGGCCCAAAGTGGATCTTGACCCAGAAACAGAGAGAACCTGGAAACTATTGATGGACAAGGGAGTAAGTGAAGGCCTTGAAGGAAATAACAAGGAAAAGGAGAAGTGGTGGGAAGAGGAAAGAGAAGTTTTTCGTGGAAGAGTCGATTCCTTCATTGCACGAATGCATCTTGTTCAAGGAGATAGACGCTTTTCACGGTGGAAGGGATCAGTAGTGGATTCAGTGATAGGAGTCTTCCTTACTCAGAATGTTTCAGATCATCTTTCAAGCTCAGCCTTCATGTCTCTAGTAGCAAGGTTTCCTCTTAAGTCAGAAAGTGGCAATAGATCATGCTGTATTGTTGGTACAGAAAAATTGGTTGAAAAACCAGAAGTCTGCATAGTAGATCGAGAAAGATTAAGTCACCCAACCTACCATCAAGGTTTTGTGCCTCCCCATGATACAAGTGAGCACTGGAGAGACTGCGAGACCTCAAGAATAAAAATAAGTCTAGAAGGTCCATATAACCAGAGCTCAAAGGATGAAATCATACTGTCACAAGATTCCCTTGATCACTCAATTGCTGAAGCCGCCAGAGGGATAAGATCCTTCTTAGGTTCCAATTCAGAAGCAGAAAGCCGAACAACTGGGTGTGAACCCTGTAAGGCTCAACTTTTAAATTCAACAAATTCTGTACAGGTAAGGAAGACCACACTGTTCCAAGAATTTTACAGTAGTGTAAATGGAGTGTCGCTGTTTGATGAGAGAACCAAAGATGGACCGGTTCTACATGCAAAATATGCCAAACAAAACTCAAAATCAGGTGAAACTGATGATCTTATTTCGCATTCAGCATTTAATCATCCGATCAATTTTGGAAATTCACAAAAGCGAGTGCCTGAAGTTTATTCAACAAACTGTGAGTTACATGAATTAGAGGCACTTGGGATGTTGAAAACTTCTCAAATGAATGGTAAGGAGTCTTCTGGGCCAGAAACTACTTCCCTCATCAACAAGTTAGAAGATACTGACTGTGGGAGAGTCAGCATCCAGGATGTAGAAGGAAGTGTAGATAAAGTGACTGAGAAGCAATATGGGCCAATTAAGTCCCAGGAGTTATCAACAATTAGCCCATATGAACCATTAAGTGTTCATGTTATCCAACTGCAAGATAACTCTCCATCAGGATCTGAGACAAATCATCATCAACCTTTATCTGGCCATCATATTGCAGGTAAGGAAATTTTAAAACCCAATGGCATGCCATTAATAGAATCAGTAAGTACCCCTCAGAAATTGAGCACAATGCAATATGATTCAGTGAAGAATTCTCCTAACATTTGTAATCACATGGAAGGTTTTCATGCTGAAAAAAGAATATCTGAGGTAAATGGACTAGCCTACTCGAATGATGGAATTGCTGAACCGAAGCCACAGGAGCAACTTAGCACTTCTGGCACCATAAATATAGAGAGCAAACAGAAAGTTTCAAAAAAGCTTGAGACTGAGAAGATGAACAAAGTTAATTGGGATGATTTAAGAAAGCGATCTCAGGCCAATGGGACAAAAAAAGAAAGGAGCAAAGAAGCAATGGATTCACTAGACTATGAAGCACTGAGACGTGCCTCAGTTAAAGAAATCTCTGATACTATTAAAGAACGAGGAATGAACAATATGCTAGCAGAACGAATCAAGGAATTTTTGGACAGACTGGTTAGAGAACATGGAAGCATTGATTTGGAGTGGTTAAGAGATGTTCCTCCAGATAAAACAAAGCAGCATATGGTTGACACAAATGTTGGAAGGATAGCAGTTAGACTTGGATGGGTCCCTCTTCAACCACTTCCTGAATCACTTCAGTTACACCTCCTTGAATTGTATCCAGTGTTGGAAACAATTCAGAAGTATCTCTGGCCCAGATTGTGCAAACTTGATCAGAGAACCTTGTATGAGCTGCACTACCAGATGATTACCTTTGGAAAGAGTGCAGACACTTTGCAAGTGCTTTTGCAAGATTATTTGATTAGTGCTGCAGCAAGTACAATTAACCGATTGCTAACCATGATGGTGCTTTCCATTATAGTGTCTTTGTTCTGGCATGTTAATGCAATCCGATCATTTACTTCTGTTTCCTTAAGCTACGTTGCTCTAGCCACCATATATGAGCAGCTTCGATGGTTTTTTTCTAAGCTGAAACTAACCATTTGTTACAGTGCCCGCCTTGCATTGCCTGGACCAGAAGAGAAAGGAATGGTGTGTAATTCCGTTCCCATTGCGACTGGGAGAAATTCTATTTTCAATATGAATGCTGCGGTACTACCTCTCCCTGCTAACAATTTGCTTAGAGAAGCAACTTCTGAAATTCGTGAGTGTGAGCCAATCATTGAAGAACCAGTAACACCGGAACAAGAGTGCCCAGATACACAGGCATTGGAAAGTGACATTGAGGACTCGTTCTGGGAGGATCCTGATGAAATTCCAACTATCAAGCTCAATACCGAAGAGTTTGCAATGAATATACAAAACATATTGCAAGAAAACATGGAGCTTGTGGAAGGTGACTTGTCTAAGGCACTTGTTGCTTTAAATCCAGCTACAGCCTCTATTCCTACACCAAAATTGAAGAATGTGAGTCGGCTACGGACAGAACACCATGTATATGAGCTTCCGGATTCTCATCCTCTCTTGGAAAAGATGGATAAGCGTGAACCTGACGACCCTAGTCCATATCTTCTTGCAATTTGGACACCAGGTGAAACTGCAAATTCGATTGAGCAACCGGAGAGAAGATGCAAATCCCAAGACTCTAACAGCCTATGCAATGACAACACATGCTTTTCATGCAATAGCGTTAGAGAAGCTAATTCGCAAACAGTCAGAGGAACTCTCCTGGTATTTGCAGATCATGCATCCAGCATTCAACCCATTGATGTCCCTAGGGAATGGTTATGGAATTTGCCAAGGAGGACTGTGTACTTTGGAACATCTGTAACATCCATTTTCAGAGGAAAGAAGCCATCAAGTCAGCAAGAAAACCGAGGAAATTTTAATTTAAGATTCAGAACCTCAAAGCCAGTGGGATTGAACTGTAAATCATCTTCATTGGAGCCCAAAGCAGCAATTCTTTGA 5418 0.4083 MINLGGKLFTLEEKQVQMNGSWVPVTPEKPVQIRPDTISAGWQENRMAGGNLKMLTVPGSGYMKEMLQCNGLDQNVHLVGETKEYNYFDGGSSTRASVNNHIDVDFDNNRLNTLELLFMQNASNDGYADRNLSESISMAVRTPVLPKFHPHTRSNGRDFNADGFTVNENRNYADSETVYTDANLSVPNRNSECDSSNLYDFLNNDAHFSFSSLLNGSLSEPEILNGGFYIPCRPKYDQNSADITEADDVFSFTNSFQSVMGTMDQFNKFTDNQFVKYVTAESQIQVTDRPDNLVASTENDHREYCDGLLQHIVDTSTATSKSYDQNEGCENNHRSGNGLDIDLNKTPEQKPPKRRKHRPKVVVEKKSKRTPNPETRKKGGSRENPSQKRKYVRKNVPKEGATPQADVLETSGSATVTRKSCRKALNFDLEDNRCKAQTATRKSGRKALHFDLEENRCNDQNKSVNQQEIQGRNGLLTELLSAASVCYDTNSALLHGKQDGLTVENKQPRSTDDSAFLLHQKLSDRFLPKEQANGTLSANTEMQIKNLLEPEKGPAQGNAGLCKERNKGCLELCICADGTDNVLLQPETCLEFPQRTQVPMSQNILHLVPNILNCIEGSSLKRKYCHADEKQYAPATNSLSSSLLHQEIFQVDENRNGTPLDKYVLKTQKRRKTPDKLGSQKVRRKSKNKSQTQLTDEKSSCYAGDSLASSDALHKICPTPIDEIICRLKDLNLGDSNISRMDGQSAIVLYNGENSVVPYEGFDFAKKRKPRPKVDLDPETERTWKLLMDKGVSEGLEGNNKEKEKWWEEEREVFRGRVDSFIARMHLVQGDRRFSRWKGSVVDSVIGVFLTQNVSDHLSSSAFMSLVARFPLKSESGNRSCCIVGTEKLVEKPEVCIVDRERLSHPTYHQGFVPPHDTSEHWRDCETSRIKISLEGPYNQSSKDEIILSQDSLDHSIAEAARGIRSFLGSNSEAESRTTGCEPCKAQLLNSTNSVQVRKTTLFQEFYSSVNGVSLFDERTKDGPVLHAKYAKQNSKSGETDDLISHSAFNHPINFGNSQKRVPEVYSTNCELHELEALGMLKTSQMNGKESSGPETTSLINKLEDTDCGRVSIQDVEGSVDKVTEKQYGPIKSQELSTISPYEPLSVHVIQLQDNSPSGSETNHHQPLSGHHIAGKEILKPNGMPLIESVSTPQKLSTMQYDSVKNSPNICNHMEGFHAEKRISEVNGLAYSNDGIAEPKPQEQLSTSGTINIESKQKVSKKLETEKMNKVNWDDLRKRSQANGTKKERSKEAMDSLDYEALRRASVKEISDTIKERGMNNMLAERIKEFLDRLVREHGSIDLEWLRDVPPDKTKQHMVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLETIQKYLWPRLCKLDQRTLYELHYQMITFGKSADTLQVLLQDYLISAAASTINRLLTMMVLSIIVSLFWHVNAIRSFTSVSLSYVALATIYEQLRWFFSKLKLTICYSARLALPGPEEKGMVCNSVPIATGRNSIFNMNAAVLPLPANNLLREATSEIRECEPIIEEPVTPEQECPDTQALESDIEDSFWEDPDEIPTIKLNTEEFAMNIQNILQENMELVEGDLSKALVALNPATASIPTPKLKNVSRLRTEHHVYELPDSHPLLEKMDKREPDDPSPYLLAIWTPGETANSIEQPERRCKSQDSNSLCNDNTCFSCNSVREANSQTVRGTLLVFADHASSIQPIDVPREWLWNLPRRTVYFGTSVTSIFRGKKPSSQQENRGNFNLRFRTSKPVGLNCKSSSLEPKAAIL 1805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2604 1805 MobiDBLite consensus disorder prediction 350 364 - -
Lele08g2604 1805 Pfam Permuted single zf-CXXC unit 1690 1721 IPR028924 -
Lele08g2604 1805 Gene3D - 1348 1428 IPR023170 -
Lele08g2604 1805 MobiDBLite consensus disorder prediction 1234 1294 - -
Lele08g2604 1805 MobiDBLite consensus disorder prediction 1257 1294 - -
Lele08g2604 1805 MobiDBLite consensus disorder prediction 669 698 - -
Lele08g2604 1805 MobiDBLite consensus disorder prediction 1239 1256 - -
Lele08g2604 1805 Pfam RRM in Demeter 1728 1771 IPR028925 -
Lele08g2604 1805 MobiDBLite consensus disorder prediction 319 411 - -
Lele08g2604 1805 SUPERFAMILY DNA-glycosylase 816 1425 IPR011257 GO:0003824|GO:0006281
Lele08g2604 1805 MobiDBLite consensus disorder prediction 365 396 - -
Lele08g2604 1805 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 283 1768 IPR044811 GO:0019104|GO:0035514|GO:0080111
Lele08g2604 1805 MobiDBLite consensus disorder prediction 319 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2604 Lele-ChrLele08 31776609 31787200 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g2604 08 31776609 31787200 Lele14g1634 14 23930618 23937111 CCT
Lele08g2604 08 31776609 31787200 Lele15g0722 15 4171883 4179143 CCT
Lele08g2604 08 31776609 31787200 Lele16g0729 16 4111822 4119496 CCT
Lele13g1689 13 25515797 25516342 Lele08g2604 08 31776609 31787200 CCT
Lele14g1629 14 23902249 23902794 Lele08g2604 08 31776609 31787200 CCT
Lele15g0728 15 4208018 4208563 Lele08g2604 08 31776609 31787200 CCT
Lele16g0733 16 4148732 4149277 Lele08g2604 08 31776609 31787200 CCT
Lele08g2604 08 31776609 31787200 Lele08g2604 08 31776609 31787200 ECH
Lele05g2678 05 42670402 42673230 Lele08g2604 08 31776609 31787200 hybridization
Lele06g2664 06 34504455 34514063 Lele08g2604 08 31776609 31787200 hybridization