Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2600 ATGATATCCATAGAAGTTCTCGCACACTGTTTGCTGCTGCTGTTTTGTTTTTCCCCACTGTTATGGACTCCAATGCAAACTGCGGTAGTTTCCATGGATTTTGGTGCAGTTGCAATTACGTACTTTTTGCAGTGGGAGCCTCTTCAGCATGAAGATGACGTTGAGCTTGGCAACTCCACTTTCCCCATGGTCCTCGTTCAAATCCCTATGTACAATGAGATTGAGGAGCAGCATGGGGGGTATAATGGCCGTCTGATAGGATCATTATTCAAGTGCAAGAGATGGGAGAGCAAAGGAATAAACATAAAGTATGAGATCAGAGAGAAGAGAAGAGGCTACAAAGCAGGAGCTCTCAAGGAAGCCATGAAGCATCCGTACGTCGCCATCTTAGATGCTGACTTCCAACCTCACGCTCATTTACTCCTCCGAACCCTTCCCTTCCTCATTCACAACCCTCAACTCGCTCTCATCCAAGCTCGCTGGAGTTTCGTAAATGCTGATGAATGCTTATTGACAAGAATGCAAGAACTAGATTACCATTTCAAAGTTGAGCAAGAAGTTGGATCCTCTACATACTCTTTCTTTGGTTTCAATGGCACAGCTGGCGTCTGGAGGCTTTCTGCATTGAATGAGGCCGGAGGATGGAAGAACAGAATCACTGTGGAAGACATGGACTTGGCTGTCCGAGCCGGTCTCAAGGGCTTCAAATTTTTGTACCTTGGTGATCTTCAGGCATCATAA 741 0.4588 MISIEVLAHCLLLLFCFSPLLWTPMQTAVVSMDFGAVAITYFLQWEPLQHEDDVELGNSTFPMVLVQIPMYNEIEEQHGGYNGRLIGSLFKCKRWESKGINIKYEIREKRRGYKAGALKEAMKHPYVAILDADFQPHAHLLLRTLPFLIHNPQLALIQARWSFVNADECLLTRMQELDYHFKVEQEVGSSTYSFFGFNGTAGVWRLSALNEAGGWKNRITVEDMDLAVRAGLKGFKFLYLGDLQAS 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2600 246 FunFam Glycosyltransferase-like protein, family 2 86 246 - -
Lele08g2600 246 Pfam Glycosyl transferase family group 2 126 239 IPR001173 -
Lele08g2600 246 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 53 246 IPR029044 -
Lele08g2600 246 SUPERFAMILY Nucleotide-diphospho-sugar transferases 92 242 IPR029044 -
Lele08g2600 246 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 91 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2600 Lele-ChrLele08 31753170 31756673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2600 43 245 Miscellaneous Gene Families AT5G03760 61.538 1.48e-94 285
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g2600 08 31753170 31756673 Lele08g2600 08 31753170 31756673 ECH
Lele05g2674 05 42644547 42649655 Lele08g2600 08 31753170 31756673 hybridization
Lele06g2661 06 34485861 34486680 Lele08g2600 08 31753170 31756673 hybridization