Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2586 ATGACTTCATTGTCTCTGTCACCAGTACAAGCTTTTTTGACTCTAAATCCATTTGATGCTTTTATTAAAAGATCATTGTGTAGTTATAGTATGCCATGTTGCCTCATCCGCCCCGGGGGCGATTTTACATCTTTCCACATTGACTGCTCAAAGGCAAATATGAAACTGCTACTCACTCAATATATCCTCATTTTCGTTCAGAGGATACCCCTGCATTATGATGACAAACAGGGCTTGTGGGTTCTCAAGAGGGAATTCACTGTAGGACACTATGAGTACAAGTACATTGTTGATGGGGAATGGACATGCAATCAGAATGAACTTGTGAAATCTCCCAACAAAGATGGCCATGTCAATAATTATCTGCAAGTAAGATCATCAGAAGACTCTAAGTTAAGTTATGAATCCATGGCTCTTACCTTCTATGAAAAGGTCATTGACGAAACAGATGGCGCCGATACCTCCCTAAGGAAGAGATTGATGGGTGATGATCCTGGTCTCACAAAGGATGAACAGCTGAGAACAACACAGCTTGTTGAAGCTCTTCCTGATGAAGAACCATGA 564 0.4113 MTSLSLSPVQAFLTLNPFDAFIKRSLCSYSMPCCLIRPGGDFTSFHIDCSKANMKLLLTQYILIFVQRIPLHYDDKQGLWVLKREFTVGHYEYKYIVDGEWTCNQNELVKSPNKDGHVNNYLQVRSSEDSKLSYESMALTFYEKVIDETDGADTSLRKRLMGDDPGLTKDEQLRTTQLVEALPDEEP 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2586 187 Pfam Glycogen recognition site of AMP-activated protein kinase 66 127 IPR032640 -
Lele08g2586 187 Gene3D Immunoglobulins 65 129 IPR013783 -
Lele08g2586 187 CDD E_set_AMPKbeta_like_N 67 124 - -
Lele08g2586 187 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 65 131 - -
Lele08g2586 187 SUPERFAMILY E set domains 69 125 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2586 Lele-ChrLele08 31619899 31624660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2586 67 186 Protein tyrosine phosphatase (PTP) family AT3G52180 40.000 5.63e-24 94.0